Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC078899.2-201ENST00000595282 212 ntBASIC2.92□□□□□ -1.94
DDX56Q9NY93 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX56Q9NY93 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX56Q9NY93 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DDX56Q9NY93 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX56Q9NY93 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX56Q9NY93 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX56Q9NY93 Y_RNA.112-201ENST00000363250 102 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 RNA5SP393-201ENST00000363423 117 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 Y_RNA.179-201ENST00000363844 90 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 SNORD46.1-201ENST00000364139 104 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 Y_RNA.314-201ENST00000365114 102 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 RNU6-793P-201ENST00000384233 104 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR549A-201ENST00000385268 96 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR1302-11-201ENST00000408051 138 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR548P-201ENST00000408336 84 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR1302-9-201ENST00000408365 138 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR1283-1-201ENST00000408494 87 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR1302-10-201ENST00000408734 138 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC018865.2-201ENST00000423631 129 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MTCYBP6-201ENST00000441810 138 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC016925.1-201ENST00000458303 298 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 SNORD116.3-201ENST00000517176 78 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 CYCSP23-201ENST00000519781 313 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX56Q9NY93 RRN3P3-201ENST00000549207 578 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC233702.2-202ENST00000562547 291 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 UBL5P4-201ENST00000562584 236 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR3171-201ENST00000584270 74 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR1302-2-201ENST00000607096 138 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC010999.1-201ENST00000611856 324 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 AC130454.1-201ENST00000622948 401 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX56Q9NY93 MIR3651-201ENST00000630427 90 ntBASIC2.91□□□□□ -1.94
DDX56Q9NY93 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX56Q9NY93 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
DDX56Q9NY93 SNORA3A-201ENST00000364113 130 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 RNY3P11-201ENST00000364153 102 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 Y_RNA.216-201ENST00000364205 93 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 Y_RNA.252-201ENST00000364556 101 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 Y_RNA.358-201ENST00000365491 99 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 RNU6-160P-201ENST00000384591 107 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 Y_RNA.605-201ENST00000410577 105 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 PMCHL1-202ENST00000423102 261 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 AC096638.1-201ENST00000444678 216 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 GSTA11P-201ENST00000452866 669 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 RNA5SP341-201ENST00000516261 117 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX56Q9NY93 PRELID2P1-201ENST00000552837 301 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX56Q9NY93 AC091925.1-201ENST00000623204 462 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 MIR203B-201ENST00000636080 86 ntBASIC2.9□□□□□ -1.95
DDX56Q9NY93 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
DDX56Q9NY93 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
DDX56Q9NY93 RNU6-222P-201ENST00000362438 107 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 MIR586-201ENST00000385035 97 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 MIR1262-201ENST00000408276 93 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 ELOCP31-201ENST00000540463 467 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 AC093023.1-201ENST00000547375 507 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 AC087588.2-201ENST00000617667 426 ntBASIC2.89□□□□□ -1.95
DDX56Q9NY93 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX56Q9NY93 RNU6-545P-201ENST00000362681 104 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 SNORD115-3-201ENST00000363100 82 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 Y_RNA.557-201ENST00000384680 107 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AL033519.2-201ENST00000403958 392 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX56Q9NY93 EIF1P2-201ENST00000428233 350 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC096644.2-201ENST00000429278 159 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC011753.1-201ENST00000451001 220 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 RNU7-169P-201ENST00000459456 61 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 RNU2-34P-201ENST00000516534 121 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC009127.3-201ENST00000570531 403 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 MIR4529-201ENST00000578110 78 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 MIR4446-201ENST00000578505 67 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC092447.9-201ENST00000603395 144 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC006157.1-201ENST00000611750 366 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC022202.1-201ENST00000613515 211 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AC007485.1-201ENST00000616755 206 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 AL078596.1-201ENST00000624856 447 ntBASIC2.88□□□□□ -1.95
DDX56Q9NY93 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
DDX56Q9NY93 RNU6-879P-201ENST00000364328 108 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 RNU6-1305P-201ENST00000364353 104 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 RNY1P14-201ENST00000384426 108 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 HMGN2P39-201ENST00000398005 273 ntBASIC2.87□□□□□ -1.95
DDX56Q9NY93 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
DDX56Q9NY93 AL445305.1-201ENST00000432577 575 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms