Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL135790.2-201ENST00000437701 267 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 MTND2P22-201ENST00000444325 1033 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 RPL36AP21-201ENST00000490372 323 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 RPS23P5-201ENST00000495419 428 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 RNU6-1038P-201ENST00000516516 104 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC090115.3-201ENST00000553218 849 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC090517.1-201ENST00000569307 266 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 MIR4424-201ENST00000585257 86 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC004223.2-201ENST00000590309 544 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 U2.17-201ENST00000611454 95 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 uc_338.34-201ENST00000617467 174 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 MTND5P26-201ENST00000426018 1752 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AC010615.1-201ENST00000594254 1764 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RNU6-862P-201ENST00000362804 105 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 SNORD73A-201ENST00000386062 65 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AL663109.1-201ENST00000411498 844 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 FTH1P12-201ENST00000432137 551 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MTCO2P3-201ENST00000442543 421 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MTND1P29-201ENST00000448112 647 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RPS26P55-201ENST00000471178 356 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 SNORA40.12-201ENST00000516329 111 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RNU6-405P-201ENST00000516637 110 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AL118558.2-201ENST00000556294 238 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AC087683.1-201ENST00000591187 441 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AC139792.3-201ENST00000623525 224 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
KLHL28Q9NXS3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 RNA5SP219-201ENST00000390940 113 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AL606923.1-201ENST00000406616 190 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 ARL5AP1-201ENST00000418991 388 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 VN1R108P-201ENST00000431580 830 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 MTCO2P18-201ENST00000457151 658 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 MTCO3P38-201ENST00000468910 766 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 RPL39P5-202ENST00000512505 151 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 MTND4P7-201ENST00000523876 130 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 AC017083.3-201ENST00000609955 700 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 MIR6863-201ENST00000636112 90 ntBASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KLHL28Q9NXS3 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 RNU4-20P-201ENST00000365601 151 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 RNU6-259P-201ENST00000383999 107 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 CALM2P3-201ENST00000400429 449 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 RNU2-7P-201ENST00000410794 178 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 snoU13.30-201ENST00000458951 104 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC093534.1-201ENST00000504977 132 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC104383.1-201ENST00000530297 370 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC008269.2-201ENST00000561915 1105 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AP001330.5-201ENST00000607176 411 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AC245008.1-201ENST00000608123 476 ntBASIC1.3□□□□□ -2.2
KLHL28Q9NXS3 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms