Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 Y_RNA.151-201ENST00000363566 112 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 SNORD114-6-201ENST00000364393 72 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AL358453.1-201ENST00000422522 250 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 MTCO1P44-201ENST00000441935 243 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 RPL23AP75-201ENST00000491601 451 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 RNU6-856P-201ENST00000516959 98 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC016727.2-201ENST00000603988 621 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC019193.3-201ENST00000609144 554 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC093913.1-201ENST00000614178 329 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 AC073869.6-201ENST00000640656 341 ntBASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.88□□□□□ -2.11
CHCHD3Q9NX63 MIR340-201ENST00000362125 95 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 SNORD50.1-201ENST00000362987 71 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 Y_RNA.490-201ENST00000384413 102 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 RNU4-53P-201ENST00000410828 140 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 FCF1P9-201ENST00000412546 282 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 SCARNA16.3-201ENST00000516595 184 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 RNU6-344P-201ENST00000516635 111 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 SNRPGP18-201ENST00000553000 214 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
CHCHD3Q9NX63 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 MIR586-201ENST00000385035 97 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 SNORD115-47-201ENST00000391226 86 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 AC108938.1-201ENST00000451204 136 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 ATP5J2P3-201ENST00000451550 258 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 RNA5SP57-201ENST00000459463 123 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 AC010531.2-201ENST00000465012 153 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 RNA5SP281-201ENST00000516504 135 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 AL353149.1-201ENST00000610667 244 ntBASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHCHD3Q9NX63 MIR449A-201ENST00000362113 91 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 SNORA12.2-201ENST00000391040 156 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 RNU6-510P-201ENST00000391239 108 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AL590632.1-201ENST00000424289 371 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 MTCO3P46-201ENST00000425787 232 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC011352.1-201ENST00000512300 793 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 RNU6-948P-201ENST00000516374 107 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 DEFB131C-201ENST00000528817 165 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 SUB1P4-201ENST00000566062 339 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC069114.2-201ENST00000604699 304 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC008873.1-201ENST00000625051 138 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AC100810.6-201ENST00000638068 285 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 AL159152.1-201ENST00000635019 2587 ntBASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHCHD3Q9NX63 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 RNU6-192P-201ENST00000391253 100 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 AC069257.2-201ENST00000441819 155 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 NFU1P2-201ENST00000448700 469 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 MTND1P17-201ENST00000448961 204 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 GNAI2P1-201ENST00000541815 315 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 SNORA59B-202ENST00000578183 701 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 AC002553.4-201ENST00000616896 331 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 AC005858.4-201ENST00000623191 700 ntBASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.84□□□□□ -2.11
CHCHD3Q9NX63 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.84□□□□□ -2.12
CHCHD3Q9NX63 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CHCHD3Q9NX63 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.83□□□□□ -2.12
CHCHD3Q9NX63 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms