Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC107626.1-201ENST00000471084 183 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AC117454.1-201ENST00000491120 168 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AC023632.4-201ENST00000517783 191 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AC008739.3-201ENST00000603262 127 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 PCGEM1.1-201ENST00000613431 131 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 CR392039.5-201ENST00000623201 510 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 MIR3653-201ENST00000625572 110 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 MTND5P18-201ENST00000445624 1801 ntBASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.16□□□□□ -1.74
CUEDC1Q9NWM3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CUEDC1Q9NWM3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CUEDC1Q9NWM3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-525P-201ENST00000363685 104 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 CD24P4-201ENST00000382840 243 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP317-201ENST00000410176 116 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP201-201ENST00000410316 124 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP311-201ENST00000411290 116 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC004866.1-201ENST00000411748 78 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC023141.4-201ENST00000412031 328 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RPL23AP83-201ENST00000434984 473 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC004386.2-201ENST00000441858 148 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNU5F-2P-201ENST00000516066 82 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP315-201ENST00000516340 116 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP143-201ENST00000516936 115 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP312-201ENST00000517068 116 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC100770.1-201ENST00000532310 322 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC018692.3-201ENST00000623929 123 ntBASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.75
CUEDC1Q9NWM3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-1107P-201ENST00000364817 104 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-484P-201ENST00000384016 107 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 U8.12-201ENST00000384701 133 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 Y_RNA.587-201ENST00000391210 103 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP39-201ENST00000411245 120 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 PARP4P3-201ENST00000510265 317 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 SNORD19.2-201ENST00000516978 73 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-762P-201ENST00000517107 102 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 IGLV3-26-201ENST00000520756 302 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 EIF4A1P12-201ENST00000551910 141 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 AL034555.1-201ENST00000604816 211 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 AL159152.1-201ENST00000635019 2587 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 AC010889.1-201ENST00000566193 2666 ntBASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CUEDC1Q9NWM3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 SPRR2C-201ENST00000290702 219 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 Y_RNA.328-201ENST00000365208 113 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 MIR518C-201ENST00000384822 101 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 MIR147B-201ENST00000390185 80 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-750P-201ENST00000390946 107 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 PTMAP2-201ENST00000397627 327 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 AL157831.1-201ENST00000426134 473 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RPL21P10-201ENST00000463521 490 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RPL36AP21-201ENST00000490372 323 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RN7SL691P-201ENST00000494487 301 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 PPBPP1-201ENST00000510807 373 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-1299P-201ENST00000516316 100 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP519-201ENST00000516480 119 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNU7-116P-201ENST00000516940 62 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RNU1-117P-201ENST00000517041 158 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 ACA59.2-201ENST00000517061 156 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 AC110741.2-201ENST00000605278 268 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 RMST_8.1-201ENST00000610287 165 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 LINC02471-203ENST00000641941 4752 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 AC006504.1-201ENST00000562493 3666 ntBASIC4.13□□□□□ -1.75
CUEDC1Q9NWM3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-674P-201ENST00000363831 107 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms