Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AL162413.1-201ENST00000603198 110 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AC004492.1-201ENST00000607036 742 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 RN7SL853P-201ENST00000617250 223 ntBASIC1.27□□□□□ -2.21
HMG20AQ9NP66 AC121333.1-201ENST00000567488 2709 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 Y_RNA.151-201ENST00000363566 112 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 SNORD113-7-201ENST00000363762 77 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 RNA5SP190-201ENST00000365222 118 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 RNU6-214P-201ENST00000384130 107 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 RNU6-332P-201ENST00000391193 108 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 MIR1323-201ENST00000408090 73 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC004866.1-201ENST00000411748 78 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC009310.1-201ENST00000414414 451 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 EIF4EP2-201ENST00000422816 654 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 MTCO1P20-201ENST00000425366 358 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 HMGN2P26-201ENST00000463169 339 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC010531.2-201ENST00000465012 153 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC097473.1-201ENST00000508142 408 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 RNU6-567P-201ENST00000516746 107 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 ZNF519P2-201ENST00000557032 169 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 MIR5094-201ENST00000578766 85 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 CPDP1-201ENST00000579660 283 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AL158827.2-201ENST00000602494 330 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC146944.4-201ENST00000602697 718 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC016925.2-201ENST00000605108 242 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC064807.4-201ENST00000607201 407 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 DISC2.1-201ENST00000612827 205 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AL691447.3-201ENST00000635020 330 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 AC024614.3-201ENST00000637860 256 ntBASIC1.26□□□□□ -2.21
HMG20AQ9NP66 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
HMG20AQ9NP66 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RNY3P3-201ENST00000363816 102 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 SNORD31B-201ENST00000364977 69 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RNU6-1286P-201ENST00000383871 107 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RNU6-418P-201ENST00000384035 107 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RNA5SP494-201ENST00000410653 129 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AL513185.2-201ENST00000425543 193 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 MTCO1P44-201ENST00000441935 243 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RNU7-66P-201ENST00000459469 62 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 U8.21-201ENST00000459536 136 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 RPS23P5-201ENST00000495419 428 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AC026371.1-201ENST00000551867 419 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 SUB1P4-201ENST00000566062 339 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 MIR4713-201ENST00000582691 75 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 U1.36-201ENST00000620684 176 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 MIR1321-201ENST00000637766 79 ntBASIC1.25□□□□□ -2.21
HMG20AQ9NP66 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMG20AQ9NP66 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 RNU6-968P-201ENST00000384076 107 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 ARL5AP1-201ENST00000418991 388 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 Z82205.1-201ENST00000428456 297 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC099677.2-201ENST00000436385 175 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 MTND1P11-201ENST00000456661 876 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC016925.1-201ENST00000458303 298 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 RNU1-131P-201ENST00000458943 161 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC114801.2-201ENST00000503825 781 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 SNORA31.17-201ENST00000516953 127 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 MTND1P35-201ENST00000526739 508 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC016957.1-201ENST00000534895 309 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 MIR3198-2-201ENST00000577868 80 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC100830.2-201ENST00000581636 240 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 AC015540.1-201ENST00000615828 501 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
HMG20AQ9NP66 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.24□□□□□ -2.21
HMG20AQ9NP66 CBX3P1-201ENST00000325243 554 ntBASIC1.23□□□□□ -2.21
HMG20AQ9NP66 Y_RNA.3-201ENST00000362331 103 ntBASIC1.23□□□□□ -2.21
HMG20AQ9NP66 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms