Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 BET1P1-201ENST00000482276 359 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 RPL39P5-202ENST00000512505 151 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC069113.1-201ENST00000517763 267 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 SUMO2P16-201ENST00000519475 264 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.57□□□□□ -2.32
VCX3BQ9H321 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.57□□□□□ -2.32
VCX3BQ9H321 MIR5695-201ENST00000579717 85 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VCX3BQ9H321 MIR98-201ENST00000606724 119 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AL603839.4-201ENST00000624658 1005 ntBASIC0.57□□□□□ -2.32
VCX3BQ9H321 AL391987.6-201ENST00000305671 199 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 Y_RNA.399-201ENST00000383955 105 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 MIR549A-201ENST00000385268 96 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 SNORA12.1-201ENST00000390873 148 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 RAB28P5-201ENST00000427490 651 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.56□□□□□ -2.32
VCX3BQ9H321 SCARNA18-201ENST00000459004 134 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.56□□□□□ -2.32
VCX3BQ9H321 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 RNU6-948P-201ENST00000516374 107 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 SNORA31.10-201ENST00000516482 106 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 RN7SKP49-201ENST00000516675 260 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC024995.1-201ENST00000523014 93 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC016256.1-201ENST00000547971 354 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC026470.2-201ENST00000561492 181 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 Z99497.2-201ENST00000603634 310 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 AC104458.1-201ENST00000608243 463 ntBASIC0.56□□□□□ -2.32
VCX3BQ9H321 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
VCX3BQ9H321 Y_RNA.287-201ENST00000364853 94 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RNU6-950P-201ENST00000384651 107 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RNU6-417P-201ENST00000384712 107 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 HMGN1P14-201ENST00000412459 517 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RPS3AP1-201ENST00000413190 320 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RPS26P42-201ENST00000413485 326 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC016909.1-201ENST00000415916 166 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC010154.1-201ENST00000425857 269 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 TIMM9P3-201ENST00000428659 274 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC010095.1-201ENST00000443543 144 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 SNORD124-201ENST00000459577 104 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 SNORA31.2-201ENST00000516019 134 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RNU6-1146P-201ENST00000516282 102 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RNU6-1069P-201ENST00000516612 133 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 MIR3941-201ENST00000582572 103 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.55□□□□□ -2.32
VCX3BQ9H321 Z84480.1-201ENST00000605131 311 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC006001.4-201ENST00000622243 395 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 AC009541.1-201ENST00000438279 2662 ntBASIC0.55□□□□□ -2.32
VCX3BQ9H321 RNU4-79P-201ENST00000362764 141 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU6-505P-201ENST00000384427 107 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU6-1031P-201ENST00000384773 107 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNA5SP213-201ENST00000391031 106 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNA5SP467-201ENST00000391274 118 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU6-584P-201ENST00000410350 95 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.54□□□□□ -2.32
VCX3BQ9H321 AC063976.4-201ENST00000421971 163 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AL591806.2-201ENST00000433122 173 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AC004386.2-201ENST00000441858 148 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 MTCO2P3-201ENST00000442543 421 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AC009237.7-201ENST00000447357 229 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 NFU1P2-201ENST00000448700 469 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VCX3BQ9H321 HSFY5P-201ENST00000453726 309 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 MTND2P39-201ENST00000457230 764 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU7-167P-201ENST00000459160 62 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RPL23AP94-201ENST00000512518 302 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 SNORA31.4-201ENST00000516049 129 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNA5SP168-201ENST00000516642 112 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 SCARNA1-201ENST00000517138 166 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 MTND2P32-201ENST00000521584 1038 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.54□□□□□ -2.32
VCX3BQ9H321 MIR5583-1-201ENST00000580941 59 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 MIR5006-201ENST00000583027 110 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AL390123.1-201ENST00000603216 237 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AC005014.3-201ENST00000605985 190 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 RNU6-85P-201ENST00000605989 107 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 TCL6_2.1-201ENST00000615162 119 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 AP001506.1-201ENST00000615444 211 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 MIR6835-201ENST00000621552 64 ntBASIC0.54□□□□□ -2.32
VCX3BQ9H321 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.54□□□□□ -2.32
VCX3BQ9H321 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
VCX3BQ9H321 MIR200A-201ENST00000384875 90 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms