Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORD116-18-201ENST00000383961 92 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 OOSP1P1-201ENST00000423265 274 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 PTGES3P4-201ENST00000426243 356 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AC009414.1-201ENST00000427200 443 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AC112220.1-201ENST00000434628 355 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.641-201ENST00000459414 105 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 HMGB3P3-201ENST00000510526 400 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AC021231.3-201ENST00000558497 370 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AC009163.5-201ENST00000575421 637 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 snoU18.1-201ENST00000629629 71 ntBASIC3.45□□□□□ -1.86
RNF38Q9H0F5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.45□□□□□ -1.86
RNF38Q9H0F5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC092268.1-201ENST00000342691 405 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU1-70P-201ENST00000362618 164 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNA5SP374-201ENST00000362939 125 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU6-727P-201ENST00000363592 107 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU6-1130P-201ENST00000365434 107 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU6-211P-201ENST00000384047 107 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC019205.3-201ENST00000424573 156 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU6-191P-201ENST00000516295 94 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 RNU6-155P-201ENST00000516347 100 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AP005660.1-201ENST00000522972 293 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC018448.1-201ENST00000552843 316 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 AC091932.3-201ENST00000624223 323 ntBASIC3.44□□□□□ -1.86
RNF38Q9H0F5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF38Q9H0F5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC092593.1-201ENST00000515413 1815 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.179-201ENST00000363844 90 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.498-201ENST00000384460 102 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 RNU6-1081P-201ENST00000384537 107 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 MIR128-1-201ENST00000384921 82 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AL512633.1-201ENST00000399931 655 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AL357139.1-201ENST00000407792 426 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC012306.1-201ENST00000423267 114 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 RAB28P5-201ENST00000427490 651 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC078809.1-201ENST00000427601 140 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC006028.1-201ENST00000438379 402 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 RPS4XP2-201ENST00000458402 793 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 RNA5SP54-201ENST00000516951 92 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC233702.2-202ENST00000562547 291 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 DEFB117-201ENST00000602356 141 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC004467.1-201ENST00000615678 330 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 UCA1.1-201ENST00000620952 75 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 MIR3529-201ENST00000637713 78 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC103988.1-201ENST00000566382 2177 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC007496.3-201ENST00000624987 3443 ntBASIC3.43□□□□□ -1.86
RNF38Q9H0F5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF38Q9H0F5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 Y_RNA.435-201ENST00000384095 112 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 MIR186-201ENST00000384988 86 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 Z92545.1-201ENST00000411782 234 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC126124.2-201ENST00000413542 321 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 BTF3P11-201ENST00000426582 477 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AL441985.1-201ENST00000457727 251 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC107626.1-201ENST00000471084 183 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC091179.3-201ENST00000474761 144 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AL121594.1-201ENST00000475906 575 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC090525.1-201ENST00000479116 478 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 RNU5F-8P-201ENST00000515941 111 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC011471.1-201ENST00000585766 187 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AL391813.1-201ENST00000603098 260 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AC110774.1-201ENST00000623567 2018 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 AL109809.4-201ENST00000603520 2185 ntBASIC3.42□□□□□ -1.86
RNF38Q9H0F5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF38Q9H0F5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms