Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-717P-201ENST00000459076 104 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 FO393415.2-201ENST00000480085 343 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 AC018868.1-201ENST00000491307 315 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 MTND3P22-201ENST00000510932 243 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 MRPS36P4-201ENST00000534436 298 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 AC098657.3-201ENST00000620434 263 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 AP000553.5-201ENST00000641933 54 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USP44Q9H0E7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU4-73P-201ENST00000363164 141 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU1-23P-201ENST00000363361 144 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU6-137P-201ENST00000363680 108 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU6-370P-201ENST00000411008 104 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU6-1304P-201ENST00000411374 106 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 SRIP3-201ENST00000413200 219 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 EDDM3CP-201ENST00000415977 425 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC021146.2-201ENST00000504736 556 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 RNU6-559P-201ENST00000516151 98 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC026470.2-201ENST00000561492 181 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC109446.1-201ENST00000566172 220 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 FRG2DP-202ENST00000566967 323 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 MIR4273-201ENST00000582824 84 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC009229.3-201ENST00000608056 282 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 MIR6715A-201ENST00000615929 79 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 AL132822.1-201ENST00000617063 513 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.43□□□□□ -2.02
USP44Q9H0E7 SCARNA4-201ENST00000629045 128 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP44Q9H0E7 MTND5P9-201ENST00000503854 1755 ntBASIC2.43□□□□□ -2.02
USP44Q9H0E7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USP44Q9H0E7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 RNU6-944P-201ENST00000364023 107 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 SNORD115-32-201ENST00000364079 82 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 Y_RNA.387-201ENST00000383918 102 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 Y_RNA.404-201ENST00000383978 102 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 MT-TD-201ENST00000387419 68 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 MIR208B-201ENST00000401172 77 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 MIR320B2-201ENST00000408479 138 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.42□□□□□ -2.02
USP44Q9H0E7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 RPL7P42-201ENST00000481005 679 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 Y_RNA.708-201ENST00000516950 96 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 APOOP3-201ENST00000536787 586 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC110588.1-201ENST00000559699 137 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
USP44Q9H0E7 MIR5696-201ENST00000578474 85 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 C8orf59P2-201ENST00000603441 271 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 AC104985.2-201ENST00000620598 500 ntBASIC2.42□□□□□ -2.02
USP44Q9H0E7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP44Q9H0E7 AL356292.1-201ENST00000283110 373 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USP44Q9H0E7 MIR29C-201ENST00000385231 88 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 SNORA75.4-201ENST00000391278 119 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AL357139.1-201ENST00000407792 426 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AC090255.1-201ENST00000495779 349 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNU6-307P-201ENST00000516743 106 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNU1-40P-201ENST00000516816 164 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNU1-97P-201ENST00000516872 164 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNA5SP54-201ENST00000516951 92 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNU6-667P-201ENST00000517186 102 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.41□□□□□ -2.02
USP44Q9H0E7 MIR4795-201ENST00000584182 89 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AL158827.2-201ENST00000602494 330 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 RMST_6.1-201ENST00000611980 203 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AC245884.12-201ENST00000615364 59 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AL691447.3-201ENST00000635020 330 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 MTND4LP32-201ENST00000636111 270 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 AL669831.3-213ENST00000636676 183 ntBASIC2.41□□□□□ -2.02
USP44Q9H0E7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
USP44Q9H0E7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.02
USP44Q9H0E7 Y_RNA.58-201ENST00000362807 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 Y_RNA.67-201ENST00000362870 100 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 Y_RNA.154-201ENST00000363624 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 RNU6-1188P-201ENST00000363795 107 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 RNY3P1-201ENST00000365085 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 RNY3-201ENST00000365484 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 Y_RNA.384-201ENST00000383909 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 SNORD116-29-201ENST00000384516 83 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
USP44Q9H0E7 RNU2-20P-201ENST00000410425 191 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 RNU2-48P-201ENST00000410694 191 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 AL137159.1-201ENST00000452808 512 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 RN7SKP210-201ENST00000459176 261 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 Y_RNA.632-201ENST00000459189 102 ntBASIC2.4□□□□□ -2.03
USP44Q9H0E7 AC007215.1-201ENST00000464893 276 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms