Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC064872.1-201ENST00000604823 1072 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 RNU6-545P-201ENST00000362681 104 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 SNORA80D-201ENST00000384488 135 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 SNORA26.3-201ENST00000391119 136 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 RNU6-607P-201ENST00000411283 108 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 AC010154.1-201ENST00000425857 269 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 AC078809.1-201ENST00000427601 140 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 USP9YP28-201ENST00000435142 589 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 RPS26P48-201ENST00000491713 339 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 RNU6-377P-201ENST00000515965 102 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 AC010376.1-201ENST00000522101 334 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.42□□□□□ -2.34
TRIM4Q9C037 AC090517.1-201ENST00000569307 266 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 AL513534.2-201ENST00000603836 250 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 RPL17P51-201ENST00000605218 238 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 AL592221.1-201ENST00000605266 382 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 SNORD3E-202ENST00000627253 216 ntBASIC0.42□□□□□ -2.34
TRIM4Q9C037 U3.4-201ENST00000363352 213 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 SNORD32A-201ENST00000364805 84 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 RNU6-1031P-201ENST00000384773 107 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.41□□□□□ -2.34
TRIM4Q9C037 EEF1A1P39-201ENST00000440791 250 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.41□□□□□ -2.34
TRIM4Q9C037 RNU4-57P-201ENST00000515980 135 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 TMF1P1-201ENST00000576058 373 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.41□□□□□ -2.34
TRIM4Q9C037 AC097478.2-201ENST00000610572 514 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
TRIM4Q9C037 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
TRIM4Q9C037 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 RNU6-336P-201ENST00000364891 107 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 RNU6-39P-201ENST00000384344 107 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 RNU6-505P-201ENST00000384427 107 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 AL035398.1-201ENST00000430869 322 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 HSFY7P-201ENST00000432672 318 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 HSFY8P-201ENST00000437934 318 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 AC112187.2-201ENST00000604345 283 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 AC080013.3-201ENST00000606839 578 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 AP001596.2-201ENST00000608410 312 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 GHRLOS.1-201ENST00000610995 70 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 AC106754.2-201ENST00000623006 233 ntBASIC0.4□□□□□ -2.35
TRIM4Q9C037 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
TRIM4Q9C037 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRIM4Q9C037 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRIM4Q9C037 snoU2-30.2-201ENST00000362805 70 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-552P-201ENST00000362869 119 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 Y_RNA.170-201ENST00000363746 110 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNY4P3-201ENST00000365254 95 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-25P-201ENST00000383873 107 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-48P-201ENST00000384161 107 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-15P-201ENST00000384534 107 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-29P-201ENST00000384637 107 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU6-950P-201ENST00000384651 107 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 AL031577.2-201ENST00000404133 280 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 HMGN2P34-201ENST00000437647 269 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.39□□□□□ -2.35
TRIM4Q9C037 SNORA31.10-201ENST00000516482 106 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 RNU2-34P-201ENST00000516534 121 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRIM4Q9C037 AC091489.2-201ENST00000566263 604 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.39□□□□□ -2.35
TRIM4Q9C037 AC013244.3-201ENST00000605614 388 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 AL158211.2-201ENST00000607282 395 ntBASIC0.39□□□□□ -2.35
TRIM4Q9C037 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TRIM4Q9C037 AC092268.1-201ENST00000342691 405 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 RNU6-30P-201ENST00000384561 107 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 RPL22P17-201ENST00000438729 315 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 MTND3P1-201ENST00000441336 220 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AL606517.2-201ENST00000442855 241 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AC098869.1-201ENST00000481627 292 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AC080078.2-201ENST00000603766 501 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 Z98751.3-201ENST00000604447 521 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AC009994.1-201ENST00000606889 253 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AC116165.2-201ENST00000616705 206 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.38□□□□□ -2.35
TRIM4Q9C037 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.38□□□□□ -2.35
TRIM4Q9C037 AL450472.1-202ENST00000637286 180 ntBASIC0.38□□□□□ -2.35
TRIM4Q9C037 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.38□□□□□ -2.35
TRIM4Q9C037 RNU6-428P-201ENST00000362942 107 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 Y_RNA.136-201ENST00000363444 102 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 MTATP6P20-201ENST00000414147 562 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL133396.1-201ENST00000432048 687 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL162395.1-201ENST00000457882 422 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms