Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU6-387P-201ENST00000411331 105 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AL133217.1-201ENST00000450980 425 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.13□□□□□ -2.39
LIMD2Q9BT23 RPL39P39-201ENST00000455840 151 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC022493.2-201ENST00000506122 481 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC104136.1-201ENST00000512969 394 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 LRRC34P2-201ENST00000514850 553 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC090517.1-201ENST00000569307 266 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC004584.2-201ENST00000570407 410 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AL391840.1-201ENST00000571144 367 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC092354.1-201ENST00000606057 376 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 AC097478.2-201ENST00000610572 514 ntBASIC0.13□□□□□ -2.39
LIMD2Q9BT23 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-199P-201ENST00000362954 107 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 SNORA2.2-201ENST00000365473 135 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 MIR936-201ENST00000401264 98 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 SNORD99-201ENST00000408612 74 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC137499.1-201ENST00000427602 88 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 MTCO2P29-201ENST00000465212 189 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-1110P-201ENST00000516462 101 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-405P-201ENST00000516637 110 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNA5SP337-201ENST00000517007 109 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-467P-201ENST00000517027 110 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC023050.3-201ENST00000541142 333 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 MIR4753-201ENST00000585119 83 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RAC1P9-201ENST00000604990 392 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-1192P-201ENST00000612197 107 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 RNU6-489P-201ENST00000618289 107 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 AL603839.4-201ENST00000624658 1005 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 MTND5P16-201ENST00000460269 1703 ntBASIC0.12□□□□□ -2.39
LIMD2Q9BT23 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.324-201ENST00000365165 102 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RNU6-61P-201ENST00000365528 109 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RNU6-417P-201ENST00000384712 107 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MIR558-201ENST00000384920 94 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MIR613-201ENST00000385248 95 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RNU6-440P-201ENST00000390882 105 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 SNORD115.1-201ENST00000391109 76 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RNA5SP467-201ENST00000391274 118 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MRPL42P3-201ENST00000401492 326 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL451046.2-201ENST00000403074 277 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL136310.1-201ENST00000404926 654 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MIR1287-201ENST00000408492 90 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL356583.2-201ENST00000426536 280 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MED13P1-201ENST00000428342 171 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 TIMM9P3-201ENST00000428659 274 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC245047.8-201ENST00000456455 284 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AK3P2-201ENST00000507976 429 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RBBP4P6-201ENST00000508098 202 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC022616.6-201ENST00000520479 119 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 MTATP6P15-201ENST00000527233 835 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC004223.2-201ENST00000590309 544 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL162730.1-201ENST00000605734 292 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AL391903.3-201ENST00000612158 163 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AP000484.1-201ENST00000620067 1252 ntBASIC0.11□□□□□ -2.39
LIMD2Q9BT23 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.11□□□□□ -2.39
LIMD2Q9BT23 RNU4-1-201ENST00000363925 141 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 SNORD116.1-201ENST00000365628 92 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 RNY1P14-201ENST00000384426 108 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 SNORD116-12-201ENST00000384468 92 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 RNU6-342P-201ENST00000384521 104 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 RNU6-1067P-201ENST00000384752 107 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 MTND3P17-201ENST00000416968 344 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC012306.1-201ENST00000423267 114 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC000111.3-201ENST00000433478 193 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 RPL23AP50-201ENST00000434149 455 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.1□□□□□ -2.39
LIMD2Q9BT23 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 RNU1-142P-201ENST00000516682 145 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
LIMD2Q9BT23 DEFB131C-201ENST00000528817 165 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC016957.1-201ENST00000534895 309 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC016256.1-201ENST00000547971 354 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC004832.4-201ENST00000608952 331 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 AC106754.2-201ENST00000623006 233 ntBASIC0.1□□□□□ -2.39
LIMD2Q9BT23 Y_RNA.116-201ENST00000363292 103 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms