Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.45□□□□□ -2.48
ABCA3Q99758 AC109445.1-201ENST00000512356 383 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 AC022868.1-201ENST00000517767 391 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 AC007751.1-201ENST00000529260 376 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 AC174048.1-201ENST00000603389 144 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.45□□□□□ -2.48
ABCA3Q99758 RNU4-15P-201ENST00000362613 141 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 SNORD32B-201ENST00000364460 84 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 RN7SKP266-201ENST00000410232 287 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 RNU7-14P-201ENST00000459331 62 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 snoU13.21-201ENST00000459368 105 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.46□□□□□ -2.48
ABCA3Q99758 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.46□□□□□ -2.48
ABCA3Q99758 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.46□□□□□ -2.48
ABCA3Q99758 MTND1P36-201ENST00000522384 936 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 AC027419.1-201ENST00000522976 328 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 AC112693.2-201ENST00000556538 232 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 AL157786.1-207ENST00000627771 695 ntBASIC-0.46□□□□□ -2.48
ABCA3Q99758 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.48
ABCA3Q99758 RNU4-76P-201ENST00000364509 141 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 RNY1P8-201ENST00000383970 114 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 MIR544A-201ENST00000384855 91 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.47□□□□□ -2.48
ABCA3Q99758 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.47□□□□□ -2.48
ABCA3Q99758 MTCO3P10-201ENST00000455912 772 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AC010531.2-201ENST00000465012 153 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 SNORA40.12-201ENST00000516329 111 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 LRRC6P1-201ENST00000532188 885 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AL606834.3-201ENST00000602615 496 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AL513423.1-201ENST00000621695 132 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 AC231657.1-201ENST00000624313 397 ntBASIC-0.47□□□□□ -2.48
ABCA3Q99758 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
ABCA3Q99758 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 SNORD115-48-201ENST00000364764 76 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 SNORD114-12-201ENST00000365400 75 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 RNA5SP323-201ENST00000391094 133 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 AL359634.1-202ENST00000404721 284 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.47□□□□□ -2.49
ABCA3Q99758 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.47□□□□□ -2.49
ABCA3Q99758 AC016925.1-201ENST00000458303 298 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 RN7SKP287-201ENST00000516546 266 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 AP001189.2-201ENST00000527320 189 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 AL133153.1-201ENST00000557756 303 ntBASIC-0.47□□□□□ -2.49
ABCA3Q99758 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
ABCA3Q99758 SNORD51.1-201ENST00000365405 77 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 RNA5SP118-201ENST00000410385 109 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 SNORA40.8-201ENST00000411034 126 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.48□□□□□ -2.49
ABCA3Q99758 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 AC024995.1-201ENST00000523014 93 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 AC115990.1-201ENST00000526957 301 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 U6.42-201ENST00000618440 107 ntBASIC-0.48□□□□□ -2.49
ABCA3Q99758 RNU6-575P-201ENST00000411326 105 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 MTCO3P43-201ENST00000440974 771 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.49□□□□□ -2.49
ABCA3Q99758 MTND2P6-201ENST00000455337 1030 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 RNU7-136P-201ENST00000458819 69 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 AC022447.4-201ENST00000504053 364 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 AC021231.3-201ENST00000558497 370 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.49□□□□□ -2.49
ABCA3Q99758 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.49□□□□□ -2.49
ABCA3Q99758 AC120349.2-201ENST00000625002 298 ntBASIC-0.49□□□□□ -2.49
ABCA3Q99758 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
ABCA3Q99758 RNA5SP467-201ENST00000391274 118 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 RNU2-42P-201ENST00000410697 113 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 MTND1P31-201ENST00000449206 961 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC093899.1-201ENST00000457984 376 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC131055.1-201ENST00000584626 316 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 MIR8054-201ENST00000620877 86 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AL603839.4-201ENST00000624658 1005 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC006927.4-201ENST00000639187 543 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 MTND5P32-201ENST00000560711 1802 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 MIR18A-201ENST00000362310 71 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC096531.1-201ENST00000419107 107 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 MTCO2P7-201ENST00000446518 666 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 RNU7-140P-201ENST00000459546 60 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC074133.1-201ENST00000515696 183 ntBASIC-0.5□□□□□ -2.49
ABCA3Q99758 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.5□□□□□ -2.49
ABCA3Q99758 SNORD113.3-201ENST00000364630 78 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 RNU4-56P-201ENST00000364700 142 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 AC016909.1-201ENST00000415916 166 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.51□□□□□ -2.49
ABCA3Q99758 RNU6-953P-201ENST00000459154 107 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms