Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 SNORD116-28-201ENST00000516123 91 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RN7SKP88-201ENST00000516847 250 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.65□□□□□ -2.31
SCAF11Q99590 MTND4P33-201ENST00000556706 766 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 SNORA59B-202ENST00000578183 701 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AP000811.1-201ENST00000603803 651 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC107304.1-201ENST00000604229 296 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC018714.1-201ENST00000605028 208 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RPL17P51-201ENST00000605218 238 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC004492.1-201ENST00000607036 742 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 7SK.8-201ENST00000612110 250 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 FAM157A-202ENST00000615155 405 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 7SK.11-201ENST00000615477 250 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC027807.2-201ENST00000616099 408 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 MIR6718-201ENST00000616153 80 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 7SK.13-201ENST00000622040 250 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RNU6-336P-201ENST00000364891 107 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 SNORD115-7-201ENST00000365306 82 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 SNORA2A-201ENST00000383885 135 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 SNORA25-201ENST00000384384 134 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 RNU6-1026P-201ENST00000384465 108 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.64□□□□□ -2.31
SCAF11Q99590 AL365184.2-201ENST00000431139 435 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AL512286.1-201ENST00000439244 400 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.64□□□□□ -2.31
SCAF11Q99590 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.64□□□□□ -2.31
SCAF11Q99590 AC010531.2-201ENST00000465012 153 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AC114982.1-201ENST00000469402 321 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.64□□□□□ -2.31
SCAF11Q99590 AC023050.3-201ENST00000541142 333 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.64□□□□□ -2.31
SCAF11Q99590 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.64□□□□□ -2.31
SCAF11Q99590 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 Z99289.3-201ENST00000605586 594 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AL121992.2-201ENST00000606262 256 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 BX284668.6-201ENST00000606899 438 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AC008147.4-201ENST00000617570 1204 ntBASIC0.64□□□□□ -2.31
SCAF11Q99590 AC092268.1-201ENST00000342691 405 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 RNU1-124P-201ENST00000363861 145 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 RNU6-877P-201ENST00000383868 107 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 SNORA29-201ENST00000384183 140 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AL117342.1-201ENST00000404861 406 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 RNU2-8P-201ENST00000410727 190 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.63□□□□□ -2.31
SCAF11Q99590 AL133396.1-201ENST00000432048 687 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
SCAF11Q99590 AC007547.1-201ENST00000462177 490 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.63□□□□□ -2.31
SCAF11Q99590 RNA5SP503-201ENST00000517047 117 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC022616.3-201ENST00000523940 148 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AL442163.3-201ENST00000554110 156 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.63□□□□□ -2.31
SCAF11Q99590 AC005771.1-201ENST00000585581 349 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC078795.3-201ENST00000602913 472 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC138749.5-201ENST00000611461 208 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 AC116165.2-201ENST00000616705 206 ntBASIC0.63□□□□□ -2.31
SCAF11Q99590 RNU5F-6P-201ENST00000362979 116 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 SNORD32A-201ENST00000364805 84 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 SNORA20.2-201ENST00000383922 131 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC060773.1-201ENST00000421698 310 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.62□□□□□ -2.31
SCAF11Q99590 AL606662.1-201ENST00000445763 553 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC013470.1-201ENST00000453438 462 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC016632.1-201ENST00000503994 196 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.62□□□□□ -2.31
SCAF11Q99590 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.62□□□□□ -2.31
SCAF11Q99590 MTCO3P7-201ENST00000510008 774 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.62□□□□□ -2.31
SCAF11Q99590 Y_RNA.672-201ENST00000516289 104 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 RNU6-1178P-201ENST00000516674 107 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SCAF11Q99590 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.62□□□□□ -2.31
SCAF11Q99590 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.62□□□□□ -2.31
SCAF11Q99590 AC090517.1-201ENST00000569307 266 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC027335.2-201ENST00000624030 375 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AP002371.2-201ENST00000624450 503 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.62□□□□□ -2.31
SCAF11Q99590 U6.114-201ENST00000636407 96 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 AC006927.3-201ENST00000638789 384 ntBASIC0.62□□□□□ -2.31
SCAF11Q99590 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
SCAF11Q99590 RNU6-1287P-201ENST00000362914 107 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 RNA5SP259-201ENST00000365541 109 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 RNU6-1060P-201ENST00000384664 107 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 MIR329-1-201ENST00000385028 80 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 RPS29P13-201ENST00000402041 169 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 USP9YP14-201ENST00000430663 563 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 AC002486.1-201ENST00000435098 391 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 AL009048.1-201ENST00000450437 298 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 AL163973.1-201ENST00000484753 577 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.61□□□□□ -2.31
SCAF11Q99590 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.61□□□□□ -2.31
SCAF11Q99590 AC011406.1-201ENST00000512440 370 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SCAF11Q99590 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
SCAF11Q99590 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms