Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNA5SP374-201ENST00000362939 125 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 RNA5SP197-201ENST00000363357 119 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.329-201ENST00000365209 107 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 RNA5SP390-201ENST00000410191 113 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 AC105137.2-201ENST00000569073 466 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 MIR4738-201ENST00000579134 87 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 AC090897.2-201ENST00000581715 130 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 U7.8-201ENST00000619968 63 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 MIR3674-201ENST00000636576 68 ntBASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 SNORA18.3-201ENST00000384122 132 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AL357075.1-201ENST00000404107 726 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 ELOCP21-201ENST00000412558 336 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 SEPT7P4-201ENST00000437076 306 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AC006028.1-201ENST00000438379 402 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AC107083.1-201ENST00000439643 279 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 Z75741.1-201ENST00000446793 314 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 RN7SL504P-201ENST00000494496 287 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-313P-201ENST00000516317 112 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 RNU2-58P-201ENST00000516403 183 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AC006199.1-201ENST00000548728 219 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AL133393.1-201ENST00000603277 287 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 AL162274.2-201ENST00000614406 332 ntBASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNGAP1Q96PV0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RNU4-17P-201ENST00000365598 141 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-22P-201ENST00000384355 107 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 MIR504-201ENST00000385065 83 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-131P-201ENST00000391144 107 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RNU2-54P-201ENST00000410299 190 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RNA5SP310-201ENST00000459084 116 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC107626.1-201ENST00000471084 183 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC006445.2-201ENST00000510061 472 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC115990.1-201ENST00000526957 301 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC026333.2-201ENST00000542164 106 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 AC011602.1-201ENST00000546484 331 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 CYP4A27P-201ENST00000567218 190 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 SNRPGP20-201ENST00000604477 205 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
SYNGAP1Q96PV0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-151P-201ENST00000364158 107 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.580-201ENST00000391004 95 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 RPS26P42-201ENST00000413485 326 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC009963.1-201ENST00000417265 157 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 BPY2DP-201ENST00000422208 265 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC025750.2-201ENST00000442609 450 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 RPS27AP9-201ENST00000477681 438 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC103975.1-201ENST00000482506 483 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 RNA5SP272-201ENST00000516095 111 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AP004242.1-201ENST00000533701 349 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 AC009127.3-201ENST00000570531 403 ntBASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNGAP1Q96PV0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 AC068647.1-201ENST00000489539 2265 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-799P-201ENST00000363567 107 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-245P-201ENST00000384020 107 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-959P-201ENST00000384671 107 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 RNU4-47P-201ENST00000410876 114 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-1199P-201ENST00000411249 104 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 AL162725.1-201ENST00000435405 301 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 AL161651.1-201ENST00000440882 223 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 AIG1P1-201ENST00000503376 148 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.797-201ENST00000515977 94 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 MIR3923-201ENST00000579521 83 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 HMGN2P15-201ENST00000585707 270 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNGAP1Q96PV0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms