Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL359880.1-201ENST00000621879 266 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC139792.3-201ENST00000623525 224 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL359697.1-201ENST00000624879 587 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC099654.12-201ENST00000639868 649 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL21A1Q96P44 RNU6-428P-201ENST00000362942 107 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 SNORD114-6-201ENST00000364393 72 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 SNORD31B-201ENST00000364977 69 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 SNORA12-201ENST00000391162 147 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 RNU6-903P-201ENST00000391270 109 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 MTCO1P21-201ENST00000416634 589 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 MTND1P1-201ENST00000445453 368 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC073415.1-201ENST00000449240 153 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 RNU7-63P-201ENST00000459054 62 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC007547.1-201ENST00000462177 490 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC104383.1-201ENST00000530297 370 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC109446.1-201ENST00000566172 220 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 EIF1P4-201ENST00000572664 335 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 MIR5583-1-201ENST00000580941 59 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC012507.3-201ENST00000603556 477 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AP001836.1-201ENST00000604675 523 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AC016925.2-201ENST00000605108 242 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 AF250324.2-201ENST00000608299 610 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 U2.17-201ENST00000611454 95 ntBASIC1.29□□□□□ -2.2
COL21A1Q96P44 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 MIR424-201ENST00000362227 98 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 RNU6-552P-201ENST00000362869 119 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 Y_RNA.255-201ENST00000364581 97 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 RNU6-996P-201ENST00000365438 107 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 Y_RNA.372-201ENST00000365599 102 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 SNORA32.2-201ENST00000384049 122 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 Y_RNA.516-201ENST00000384541 124 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL21A1Q96P44 C8orf59P1-201ENST00000429930 303 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AL031274.1-201ENST00000450334 232 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC007395.1-201ENST00000451333 677 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC009474.2-201ENST00000451383 136 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC130509.1-201ENST00000464158 433 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 SRRM1P2-201ENST00000464531 1192 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 SNRPGP7-201ENST00000469016 106 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 AL163973.1-201ENST00000484753 577 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC008628.2-201ENST00000502605 298 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC019235.1-201ENST00000503847 207 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 SNORA40.12-201ENST00000516329 111 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 RNU6-506P-201ENST00000516553 94 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 SNORA31.16-201ENST00000516773 139 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AP003034.1-201ENST00000534621 422 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC016957.1-201ENST00000534895 309 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 HIF1AP1-201ENST00000553642 175 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 AL354950.2-201ENST00000617939 290 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AC073534.2-201ENST00000620377 381 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.28□□□□□ -2.2
COL21A1Q96P44 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL21A1Q96P44 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
COL21A1Q96P44 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
COL21A1Q96P44 RNU6-1085P-201ENST00000363576 107 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 RNU6-414P-201ENST00000363705 104 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.27□□□□□ -2.21
COL21A1Q96P44 UBE2V1P8-201ENST00000437166 265 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 MTCO2P3-201ENST00000442543 421 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC016925.1-201ENST00000458303 298 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 snoU13.9-201ENST00000458927 103 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 RNU7-180P-201ENST00000459240 63 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC083798.1-201ENST00000472671 131 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 ATP5EP1-201ENST00000510257 156 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 RNU6-314P-201ENST00000516574 104 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 Y_RNA.704-201ENST00000516851 102 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.27□□□□□ -2.21
COL21A1Q96P44 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.27□□□□□ -2.21
COL21A1Q96P44 Z98751.3-201ENST00000604447 521 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC012557.2-201ENST00000605919 418 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 AC002044.1-201ENST00000606707 158 ntBASIC1.27□□□□□ -2.21
COL21A1Q96P44 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU1-76P-201ENST00000362903 159 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-112P-201ENST00000363599 104 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-1322P-201ENST00000364309 107 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-827P-201ENST00000365553 106 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 SNORA69-201ENST00000383895 132 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms