| CLUHP3 | Q96NS8 | MIR2116-201 | ENST00000517221 | 80 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC025647.1-201 | ENST00000517879 | 253 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | GNG2-205 | ENST00000554736 | 569 nt | APPRIS P1 TSL 4 BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC106785.1-201 | ENST00000565935 | 262 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNVU1-4-201 | ENST00000612985 | 164 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC083809.1-201 | ENST00000615051 | 472 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | MIR7153-201 | ENST00000637758 | 57 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | VGLL4-219 | ENST00000638314 | 93 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | ZNF99-201 | ENST00000397104 | 3114 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | MACF1-201 | ENST00000289893 | 19141 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | EMSY-210 | ENST00000529032 | 6848 nt | APPRIS P3 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNA5SP399-201 | ENST00000364003 | 117 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNA5SP130-201 | ENST00000364431 | 114 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | SNORD14D-201 | ENST00000384390 | 87 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AL513185.1-201 | ENST00000431638 | 162 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RN7SL93P-201 | ENST00000463035 | 293 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC010531.2-201 | ENST00000465012 | 153 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RN7SL385P-201 | ENST00000468873 | 276 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AC091959.1-201 | ENST00000495857 | 238 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RN7SKP21-201 | ENST00000516503 | 220 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNU6-388P-201 | ENST00000517012 | 105 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | RNU6-389P-201 | ENST00000517048 | 105 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | MIR3668-201 | ENST00000582138 | 75 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AL162424.1-201 | ENST00000602325 | 221 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | AL357054.2-201 | ENST00000607644 | 423 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | MIR6867-201 | ENST00000610636 | 67 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | CCL14-203 | ENST00000620991 | 426 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | OR2L2-203 | ENST00000642011 | 4225 nt | APPRIS P1 BASIC | 2.91 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | C6orf10-201 | ENST00000375007 | 2125 nt | APPRIS ALT2 TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | PIGN-240 | ENST00000639912 | 6530 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | KNTC1-201 | ENST00000333479 | 6975 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| CLUHP3 | Q96NS8 | WNK3-202 | ENST00000375159 | 5403 nt | APPRIS P3 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | SNORD27-201 | ENST00000363981 | 72 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | MIR873-201 | ENST00000401120 | 77 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU6ATAC23P-201 | ENST00000408448 | 123 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL691449.1-201 | ENST00000426570 | 421 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | LINC01969-201 | ENST00000514468 | 455 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU6-966P-201 | ENST00000516479 | 104 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC012413.1-201 | ENST00000521294 | 519 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | CYCSP26-201 | ENST00000534107 | 320 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | PARP1P2-201 | ENST00000556806 | 195 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC012435.2-201 | ENST00000562869 | 361 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC004147.1-201 | ENST00000580658 | 299 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | DEFB117-201 | ENST00000602356 | 141 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL591424.2-201 | ENST00000617023 | 128 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | MIR6810-201 | ENST00000622701 | 70 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL161912.2-201 | ENST00000565707 | 3007 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | MARCH7-202 | ENST00000409175 | 2402 nt | APPRIS P1 TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | LIG4-201 | ENST00000356922 | 4096 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | TAX1BP1-213 | ENST00000543117 | 3365 nt | APPRIS ALT2 TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU4-80P-201 | ENST00000363200 | 141 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNA5SP97-201 | ENST00000365006 | 84 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL031121.1-201 | ENST00000406553 | 254 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | DBIP2-201 | ENST00000419076 | 262 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL357552.1-201 | ENST00000445254 | 415 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC003988.1-201 | ENST00000447198 | 578 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AL500522.2-201 | ENST00000448562 | 343 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU6-191P-201 | ENST00000516295 | 94 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNA5SP179-201 | ENST00000517284 | 121 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | CEP57-213 | ENST00000541150 | 2911 nt | APPRIS ALT2 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | LINC01919-202 | ENST00000579506 | 384 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | MIR4697-201 | ENST00000582977 | 78 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AP005264.4-201 | ENST00000592203 | 422 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC091167.4-201 | ENST00000605079 | 184 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC090425.1-201 | ENST00000610007 | 140 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | NRDE2-210 | ENST00000628832 | 132 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | PPIP5K2-217 | ENST00000627916 | 6010 nt | APPRIS ALT2 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | FIGNL1-201 | ENST00000356889 | 3471 nt | APPRIS P1 TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.277-201 | ENST00000364754 | 102 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU1-13P-201 | ENST00000384499 | 162 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNU6-160P-201 | ENST00000384591 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | TRAJ18-201 | ENST00000390519 | 66 nt | APPRIS P1 BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RPL21P65-201 | ENST00000406094 | 466 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AP000235.1-201 | ENST00000424017 | 479 nt | TSL 3 BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AC097662.1-205 | ENST00000433324 | 241 nt | TSL 5 BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | HSPE1P13-201 | ENST00000451143 | 297 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | RNA5SP380-201 | ENST00000517190 | 98 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | MIR3126-201 | ENST00000577443 | 74 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | CLLU1-201 | ENST00000378485 | 3897 nt | APPRIS P1 TSL 1 (best) BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.82-201 | ENST00000363000 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.92-201 | ENST00000363043 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.235-201 | ENST00000364412 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.306-201 | ENST00000365015 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.312-201 | ENST00000365089 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | Y_RNA.322-201 | ENST00000365151 | 102 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| CLUHP3 | Q96NS8 | SNORA20B-201 | ENST00000384220 | 132 nt | BASIC | 2.87 | □□□□□ -1.95 | | |