Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 USP9YP16-201ENST00000430287 407 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 AC245102.2-201ENST00000448956 180 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 USP9YP23-201ENST00000455085 407 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 RNU7-87P-201ENST00000459343 62 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 AP000870.1-201ENST00000472927 406 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 RNU6-991P-201ENST00000516168 107 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 SNORA25.14-201ENST00000516481 132 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 GTF3AP2-201ENST00000557014 266 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 CYP2C61P-201ENST00000604072 290 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 AC022202.1-201ENST00000613515 211 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC138Q96M89 MTND5P16-201ENST00000460269 1703 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR625-201ENST00000385047 85 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR9-1-201ENST00000385198 89 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 RNU6-1156P-201ENST00000410365 100 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 WARS2P1-201ENST00000429678 537 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 AC108938.1-201ENST00000451204 136 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 ATP5EP1-201ENST00000510257 156 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 RNU6-1114P-201ENST00000516022 107 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 PRELID2P1-201ENST00000552837 301 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 AL031274.2-201ENST00000599419 203 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 AL133255.1-201ENST00000606374 441 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR1244-1-201ENST00000612829 85 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR1244-3-201ENST00000635744 85 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR1244-2-201ENST00000636449 85 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR1244-4-202ENST00000636813 85 ntBASIC2.63□□□□□ -1.99
CCDC138Q96M89 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC138Q96M89 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 RNU6-873P-201ENST00000363833 107 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 SNORA3A-201ENST00000364113 130 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 MIR559-201ENST00000385188 96 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 RNU1-139P-201ENST00000391307 165 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 MIR300-201ENST00000401138 83 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 RNA5SP270-201ENST00000411361 118 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC138Q96M89 MIR2053-201ENST00000459295 91 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 UBL5P4-201ENST00000562584 236 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AC090617.3-201ENST00000573670 475 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AC080078.3-201ENST00000605407 463 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AC025754.2-201ENST00000606491 432 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC138Q96M89 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC138Q96M89 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
CCDC138Q96M89 RNU6-874P-201ENST00000362390 105 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 RNU1-62P-201ENST00000362599 164 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 SNORA67.1-201ENST00000364749 141 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 Y_RNA.332-201ENST00000365271 113 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 MIR10B-201ENST00000385011 110 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 SNORA40.19-201ENST00000390846 128 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 Y_RNA.579-201ENST00000390939 94 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 MIR1262-201ENST00000408276 93 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 RNU2-52P-201ENST00000410680 190 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC138Q96M89 UBE2V1P7-201ENST00000446395 340 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 RNU6-344P-201ENST00000516635 111 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 RNU7-4P-201ENST00000516961 62 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC138Q96M89 MIR7106-201ENST00000612419 65 ntBASIC2.61□□□□□ -1.99
CCDC138Q96M89 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC138Q96M89 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CCDC138Q96M89 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC138Q96M89 RNU6-222P-201ENST00000362438 107 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 Y_RNA.99-201ENST00000363138 105 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 SNORD14D-201ENST00000384390 87 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 MIR29C-201ENST00000385231 88 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC004866.1-201ENST00000411748 78 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC123900.1-201ENST00000420390 96 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AL445305.1-201ENST00000432577 575 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC099799.1-201ENST00000439809 192 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC138Q96M89 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC138Q96M89 RNU6-1170P-201ENST00000515974 106 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 RRN3P3-201ENST00000549207 578 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 MIR5695-201ENST00000579717 85 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AL050343.2-201ENST00000607338 280 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC005296.1-201ENST00000616145 209 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC073544.1-201ENST00000600110 1595 ntBASIC2.6□□□□□ -1.99
CCDC138Q96M89 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC138Q96M89 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms