Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS50Q96JG6 AL442163.3-201ENST00000554110 156 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 MIR5695-201ENST00000579717 85 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 AC016727.2-201ENST00000603988 621 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
VPS50Q96JG6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS50Q96JG6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS50Q96JG6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS50Q96JG6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNA5SP361-201ENST00000362686 118 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNU6-318P-201ENST00000384283 103 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNU6-159P-201ENST00000391080 106 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNU1-139P-201ENST00000391307 165 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 MTND3P2-201ENST00000438452 342 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS50Q96JG6 RPS3P1-201ENST00000456781 192 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC010655.3-201ENST00000478818 450 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 RNU6-911P-201ENST00000516523 104 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 Y_RNA.721-201ENST00000517207 102 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AP002770.2-201ENST00000543613 532 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS50Q96JG6 AL117187.1-201ENST00000555482 181 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC125232.2-201ENST00000592457 143 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS50Q96JG6 AL049779.4-201ENST00000604500 156 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC005520.5-201ENST00000613926 164 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AL138825.1-201ENST00000618587 192 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC137590.2-201ENST00000619709 240 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 AC080128.1-201ENST00000474389 1917 ntBASIC2.72□□□□□ -1.97
VPS50Q96JG6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS50Q96JG6 ZNF271P-202ENST00000465539 1970 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 ZNF204P-201ENST00000416749 2397 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU6-1301P-201ENST00000362724 104 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU4-56P-201ENST00000364700 142 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 DEFA7P-201ENST00000382676 285 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 MIR568-201ENST00000385036 95 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 MIR1252-201ENST00000408861 65 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 RPS26P42-201ENST00000413485 326 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC090515.1-201ENST00000465295 476 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU6-567P-201ENST00000516746 107 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC131281.1-201ENST00000522984 164 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 GTF3AP2-201ENST00000557014 266 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 AC008269.2-201ENST00000561915 1105 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 AL356280.1-201ENST00000603614 379 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.71□□□□□ -1.98
VPS50Q96JG6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS50Q96JG6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS50Q96JG6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS50Q96JG6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-873P-201ENST00000363833 107 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 SNORD115-8-201ENST00000363856 82 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-879P-201ENST00000364328 108 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 SNORD115-38-201ENST00000365037 82 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-281P-201ENST00000384212 103 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-574P-201ENST00000384265 107 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 SNORA46.1-201ENST00000391069 153 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNA5SP184-201ENST00000411071 108 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-130P-201ENST00000411112 103 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-1001P-201ENST00000411265 100 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 MTCO3P19-201ENST00000415864 321 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 CR769767.1-201ENST00000436337 346 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC096638.1-201ENST00000444678 216 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC093852.1-201ENST00000503587 266 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RNU6-397P-201ENST00000516226 104 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 DEFB131C-201ENST00000528817 165 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AC090517.1-201ENST00000569307 266 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 RAC1P9-201ENST00000604990 392 ntBASIC2.7□□□□□ -1.98
VPS50Q96JG6 AL021879.1-201ENST00000611756 288 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 1127.7 ms