Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 WARS2P1-201ENST00000429678 537 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-1114P-201ENST00000516022 107 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-475P-201ENST00000516073 104 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-1137P-201ENST00000517073 99 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AC022868.1-201ENST00000517767 391 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 MIR4680-201ENST00000580906 66 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AC016727.2-201ENST00000603988 621 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 AC243829.7-201ENST00000633081 225 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 ZNF204P-201ENST00000416749 2397 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 SNORD115-8-201ENST00000363856 82 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 SNORD115-38-201ENST00000365037 82 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.527-201ENST00000384573 102 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-159P-201ENST00000391080 106 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.645-201ENST00000391229 102 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.597-201ENST00000410463 100 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AC112492.4-201ENST00000456549 352 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AC107032.1-201ENST00000485945 480 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AC132942.1-201ENST00000486753 483 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 CKS1BP2-201ENST00000497342 240 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA40.14-201ENST00000516543 86 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 RNA5SP54-201ENST00000516951 92 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-586P-201ENST00000517265 104 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 MIR5695-201ENST00000579717 85 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AC104695.3-201ENST00000604052 296 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AL162373.1-201ENST00000620433 407 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AC010297.1-201ENST00000623948 149 ntBASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.93□□□□□ -1.94
CDK5RAP3Q96JB5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-137P-201ENST00000363680 108 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA80A-201ENST00000363922 136 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA63C-201ENST00000364578 129 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 MIR10B-201ENST00000385011 110 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 RNU1-139P-201ENST00000391307 165 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 MTCO3P19-201ENST00000415864 321 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 AC113618.1-201ENST00000416747 285 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 AC007215.1-201ENST00000464893 276 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-327P-201ENST00000516270 127 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-911P-201ENST00000516523 104 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 AL049779.4-201ENST00000604500 156 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 AC005296.1-201ENST00000616145 209 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 MIR5739-201ENST00000619803 80 ntBASIC2.92□□□□□ -1.94
CDK5RAP3Q96JB5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-879P-201ENST00000364328 108 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-450P-201ENST00000364654 107 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA67.1-201ENST00000364749 141 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 SNORD14.1-201ENST00000365609 90 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.389-201ENST00000383924 113 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-738P-201ENST00000384531 106 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AC003685.2-201ENST00000422795 395 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 MTND2P23-201ENST00000422990 651 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 EIF1P2-201ENST00000428233 350 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 MIR2355-201ENST00000517199 87 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RNU1-104P-201ENST00000517280 175 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AC090517.1-201ENST00000569307 266 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 AL033523.1-201ENST00000605153 153 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 PART1_1.1-201ENST00000611761 217 ntBASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDK5RAP3Q96JB5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.9□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA5B-201ENST00000363786 132 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-873P-201ENST00000363833 107 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-708P-201ENST00000384217 107 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 MIR196B-201ENST00000384852 84 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 NDUFB4P4-201ENST00000404822 243 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-101P-201ENST00000410323 104 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 AC027124.2-201ENST00000428249 105 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 SNORA25.14-201ENST00000516481 132 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 AC040926.1-201ENST00000530195 238 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 CBX3P7-201ENST00000532876 502 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms