Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC006600.1-201ENST00000572529 153 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 MIR4446-201ENST00000578505 67 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 AL355297.2-201ENST00000604792 129 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.95□□□□□ -1.94
HPS3Q969F9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.95□□□□□ -1.94
HPS3Q969F9 AL132822.1-201ENST00000617063 513 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 MIR4272-201ENST00000635924 64 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HPS3Q969F9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HPS3Q969F9 ZNF204P-201ENST00000416749 2397 ntBASIC2.95□□□□□ -1.94
HPS3Q969F9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.95□□□□□ -1.94
HPS3Q969F9 RNU6-222P-201ENST00000362438 107 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 Y_RNA.148-201ENST00000363557 117 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 RNY3P11-201ENST00000364153 102 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 SNORA33.2-201ENST00000365413 134 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 RNU6-245P-201ENST00000384020 107 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 Y_RNA.557-201ENST00000384680 107 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HPS3Q969F9 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 AC096644.2-201ENST00000429278 159 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 WARS2P1-201ENST00000429678 537 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 RNU4-77P-201ENST00000516692 156 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.94□□□□□ -1.94
HPS3Q969F9 AC016727.2-201ENST00000603988 621 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 FO624990.1-201ENST00000636373 85 ntBASIC2.94□□□□□ -1.94
HPS3Q969F9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.94□□□□□ -1.94
HPS3Q969F9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
HPS3Q969F9 AC005592.1-201ENST00000566527 1640 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HPS3Q969F9 RNU6-639P-201ENST00000384074 107 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 MIR487A-201ENST00000385009 80 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 MIR95-201ENST00000385072 81 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 SNORA12-201ENST00000391162 147 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 MRPL42P3-201ENST00000401492 326 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AC003685.2-201ENST00000422795 395 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AL160004.2-201ENST00000432935 350 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS3Q969F9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS3Q969F9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS3Q969F9 SNORA40.14-201ENST00000516543 86 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AC022868.1-201ENST00000517767 391 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AC006504.6-201ENST00000590142 199 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS3Q969F9 AC005296.1-201ENST00000616145 209 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 AC005562.2-201ENST00000618264 111 ntBASIC2.93□□□□□ -1.94
HPS3Q969F9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS3Q969F9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
HPS3Q969F9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS3Q969F9 AC135776.4-201ENST00000624300 1904 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 MIR449A-201ENST00000362113 91 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 Y_RNA.80-201ENST00000362996 102 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 SNORD32B-201ENST00000364460 84 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 Y_RNA.424-201ENST00000384063 103 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 Y_RNA.526-201ENST00000384572 110 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HPS3Q969F9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HPS3Q969F9 AC027124.2-201ENST00000428249 105 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC108938.1-201ENST00000451204 136 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.92□□□□□ -1.94
HPS3Q969F9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 SNORA25.14-201ENST00000516481 132 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 SNORA48.11-201ENST00000517015 89 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC109329.2-201ENST00000519658 482 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.92□□□□□ -1.94
HPS3Q969F9 MIR5695-201ENST00000579717 85 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 MIR4435-1-201ENST00000582552 80 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC040896.1-201ENST00000613819 479 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 AC138305.3-201ENST00000624988 240 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HPS3Q969F9 Z82209.1-201ENST00000422141 2135 ntBASIC2.92□□□□□ -1.94
HPS3Q969F9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HPS3Q969F9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HPS3Q969F9 RNU6-944P-201ENST00000364023 107 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 RNU6-879P-201ENST00000364328 108 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 RNA5SP126-201ENST00000365092 109 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 RNU6-26P-201ENST00000383985 107 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 RNU6-546P-201ENST00000383991 107 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 MIR592-201ENST00000384959 97 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 MIR10B-201ENST00000385011 110 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.91□□□□□ -1.94
HPS3Q969F9 EIF1P2-201ENST00000428233 350 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC096638.1-201ENST00000444678 216 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC107032.1-201ENST00000485945 480 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.91□□□□□ -1.94
HPS3Q969F9 AC018630.3-201ENST00000542637 96 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 UBL5P4-201ENST00000562584 236 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC023824.2-201ENST00000566185 400 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AC099654.10-201ENST00000640395 161 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
HPS3Q969F9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms