Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNA5SP213-201ENST00000391031 106 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AL590135.1-201ENST00000422215 156 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AC019205.3-201ENST00000424573 156 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AL358075.3-201ENST00000426289 226 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AC016700.2-201ENST00000446011 156 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AP000870.1-201ENST00000472927 406 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.34□□□□□ -1.87
RTF1Q92541 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.34□□□□□ -1.87
RTF1Q92541 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.34□□□□□ -1.87
RTF1Q92541 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
RTF1Q92541 U4.3-201ENST00000621047 82 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.34□□□□□ -1.87
RTF1Q92541 U6.92-201ENST00000636464 89 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.88
RTF1Q92541 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RTF1Q92541 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.88
RTF1Q92541 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.33□□□□□ -1.88
RTF1Q92541 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTF1Q92541 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.33□□□□□ -1.88
RTF1Q92541 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTF1Q92541 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 CD24P4-201ENST00000382840 243 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 RNU6-505P-201ENST00000384427 107 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 RNU6-1140P-201ENST00000410517 106 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.33□□□□□ -1.88
RTF1Q92541 AC138623.1-201ENST00000418060 216 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AC010469.2-201ENST00000496412 480 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 Y_RNA.668-201ENST00000516233 93 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AC022868.1-201ENST00000517767 391 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AC027176.1-201ENST00000560204 514 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AL078605.1-201ENST00000603529 500 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 AC130454.1-201ENST00000622948 401 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.33□□□□□ -1.88
RTF1Q92541 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.33□□□□□ -1.88
RTF1Q92541 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTF1Q92541 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 Y_RNA.512-201ENST00000384518 102 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 AL133475.1-201ENST00000404414 305 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 RNU6-130P-201ENST00000411112 103 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 AC096638.1-201ENST00000444678 216 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.32□□□□□ -1.88
RTF1Q92541 RNU6-397P-201ENST00000516226 104 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 RNY3P15-201ENST00000516297 97 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 RNU6-1012P-201ENST00000516606 109 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 SNORD98-201ENST00000636377 67 ntBASIC3.32□□□□□ -1.88
RTF1Q92541 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.32□□□□□ -1.88
RTF1Q92541 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RTF1Q92541 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.31□□□□□ -1.88
RTF1Q92541 OR56A5-201ENST00000340110 738 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTF1Q92541 Y_RNA.19-201ENST00000362462 99 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNU4-56P-201ENST00000364700 142 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNU6-1027P-201ENST00000383998 107 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNA5SP210-201ENST00000391034 120 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 SNORD78.2-201ENST00000391076 69 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNU6-159P-201ENST00000391080 106 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNA5SP354-201ENST00000391247 136 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNA5SP508-201ENST00000411327 119 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.31□□□□□ -1.88
RTF1Q92541 RPS15AP7-201ENST00000439294 405 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.31□□□□□ -1.88
RTF1Q92541 AP000705.1-201ENST00000454567 350 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 AP001324.2-201ENST00000461163 319 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 HMGB1P35-201ENST00000503360 598 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.31□□□□□ -1.88
RTF1Q92541 AC025465.3-201ENST00000510570 311 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNU5F-2P-201ENST00000516066 82 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 SNORA31.16-201ENST00000516773 139 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNA5SP54-201ENST00000516951 92 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 RNU6-58P-201ENST00000517143 103 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.31□□□□□ -1.88
RTF1Q92541 CYP4A27P-201ENST00000567218 190 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 AC125232.2-201ENST00000592457 143 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 AC023043.3-201ENST00000593113 385 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
RTF1Q92541 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTF1Q92541 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.31□□□□□ -1.88
RTF1Q92541 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.31□□□□□ -1.88
RTF1Q92541 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
RTF1Q92541 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.3□□□□□ -1.88
RTF1Q92541 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.3□□□□□ -1.88
RTF1Q92541 RNU6-212P-201ENST00000362642 104 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 RNU6-529P-201ENST00000363383 104 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 Y_RNA.439-201ENST00000384119 94 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 MIR10B-201ENST00000385011 110 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 AC009963.1-201ENST00000417265 157 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 PCNPP5-201ENST00000452246 481 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 snoU13.6-201ENST00000458785 104 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 RN7SL297P-201ENST00000483161 293 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 RPS27P26-201ENST00000494583 239 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 AC110588.1-201ENST00000559699 137 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms