Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
HMGB4Q8WW32 MTND5P16-201ENST00000460269 1703 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 RNU6-222P-201ENST00000362438 107 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 Y_RNA.314-201ENST00000365114 102 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 RNU6-541P-201ENST00000384709 110 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 MIR549A-201ENST00000385268 96 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 RNU6-159P-201ENST00000391080 106 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 RNU1-139P-201ENST00000391307 165 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.57□□□□□ -2
HMGB4Q8WW32 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.57□□□□□ -2
HMGB4Q8WW32 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.57□□□□□ -2
HMGB4Q8WW32 AL035666.1-201ENST00000446195 348 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.57□□□□□ -2
HMGB4Q8WW32 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 Y_RNA.661-201ENST00000516003 99 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
HMGB4Q8WW32 AC020661.2-201ENST00000560114 134 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 AC090517.1-201ENST00000569307 266 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
HMGB4Q8WW32 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
HMGB4Q8WW32 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
HMGB4Q8WW32 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 Y_RNA.31-201ENST00000362574 102 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU1-115P-201ENST00000365329 160 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU6-1227P-201ENST00000383981 107 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 MIR561-201ENST00000385216 97 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNA5SP213-201ENST00000391031 106 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AL590004.2-201ENST00000404787 371 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 MIR548P-201ENST00000408336 84 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 PMCHL1-202ENST00000423102 261 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 USP9YP16-201ENST00000430287 407 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
HMGB4Q8WW32 USP9YP23-201ENST00000455085 407 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.56□□□□□ -2
HMGB4Q8WW32 DEFB131C-201ENST00000528817 165 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AC022616.8-201ENST00000533569 253 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.56□□□□□ -2
HMGB4Q8WW32 AC026470.2-201ENST00000561492 181 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AC090617.3-201ENST00000573670 475 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.56□□□□□ -2
HMGB4Q8WW32 AC138305.3-201ENST00000624988 240 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.56□□□□□ -2
HMGB4Q8WW32 AL355596.1-201ENST00000565399 3996 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HMGB4Q8WW32 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HMGB4Q8WW32 ZNF204P-201ENST00000416749 2397 ntBASIC2.56□□□□□ -2
HMGB4Q8WW32 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HMGB4Q8WW32 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HMGB4Q8WW32 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
HMGB4Q8WW32 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU4-42P-201ENST00000364738 142 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 Y_RNA.358-201ENST00000365491 99 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU6-26P-201ENST00000383985 107 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU6-546P-201ENST00000383991 107 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNY1P14-201ENST00000384426 108 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR10B-201ENST00000385011 110 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 SNORA69.1-201ENST00000390904 137 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU6-308P-201ENST00000390957 107 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR1302-11-201ENST00000408051 138 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR1302-9-201ENST00000408365 138 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR1302-10-201ENST00000408734 138 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU2-48P-201ENST00000410694 191 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 WARS2P1-201ENST00000429678 537 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU7-87P-201ENST00000459343 62 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 snoU13.26-201ENST00000459452 105 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RN7SL499P-201ENST00000481141 276 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RNU6-1114P-201ENST00000516022 107 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 AC144568.1-201ENST00000520139 137 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGB4Q8WW32 UBL5P4-201ENST00000562584 236 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 RPL17P51-201ENST00000605218 238 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 MIR1302-2-201ENST00000607096 138 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGB4Q8WW32 AC005562.2-201ENST00000618264 111 ntBASIC2.55□□□□□ -2
HMGB4Q8WW32 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.55□□□□□ -2
HMGB4Q8WW32 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
HMGB4Q8WW32 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.55□□□□□ -2
HMGB4Q8WW32 RNY3P11-201ENST00000364153 102 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 SNORA18.2-201ENST00000383865 132 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 Y_RNA.557-201ENST00000384680 107 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 Y_RNA.592-201ENST00000410274 109 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 RPL19P1-201ENST00000411635 428 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
HMGB4Q8WW32 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.54□□□□□ -2
HMGB4Q8WW32 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
HMGB4Q8WW32 AC027124.2-201ENST00000428249 105 ntBASIC2.54□□□□□ -2
HMGB4Q8WW32 AC005534.2-201ENST00000431047 433 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms