Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 AL133396.1-201ENST00000432048 687 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RPL22P13-201ENST00000493291 347 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RPS29P11-201ENST00000496507 171 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 SUMO2P6-201ENST00000505273 288 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNED1Q8TER0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 MTND4LP5-201ENST00000605152 292 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU6-874P-201ENST00000362390 105 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNY1P16-201ENST00000363063 111 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.106-201ENST00000363189 100 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNY3P11-201ENST00000364153 102 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.257-201ENST00000364596 102 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU6-713P-201ENST00000384761 107 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU6-325P-201ENST00000411132 105 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 CHEK2P4-201ENST00000450340 246 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MTCO3P8-201ENST00000453691 755 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU7-169P-201ENST00000459456 61 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNU6-1037P-201ENST00000459571 107 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 FO393415.2-201ENST00000480085 343 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AC022493.1-201ENST00000492984 337 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 GZMAP1-201ENST00000503054 631 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 SNORA40.14-201ENST00000516543 86 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 RNA5SP471-201ENST00000516971 106 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 CBX3P8-201ENST00000532412 525 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MIR5188-201ENST00000583467 113 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AC125232.2-201ENST00000592457 143 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AC002545.1-201ENST00000592511 181 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MIR3976-201ENST00000606807 139 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 HMGB1P24-202ENST00000615653 685 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 AL138825.1-201ENST00000618587 192 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MIR8062-201ENST00000621515 85 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 MIR4272-201ENST00000635924 64 ntBASIC2.42□□□□□ -2.02
SNED1Q8TER0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNED1Q8TER0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNED1Q8TER0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 SNORA68.1-201ENST00000364537 132 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 U8.10-201ENST00000384260 133 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 MIR7-2-201ENST00000384970 110 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 DAP3P1-201ENST00000441522 278 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 RPL9P9-202ENST00000466501 579 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 RNU6-408P-201ENST00000515910 100 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 RNU1-86P-201ENST00000516108 154 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 MIR892C-201ENST00000516410 77 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 RNU1-107P-201ENST00000516617 154 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC040926.1-201ENST00000530195 238 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.41□□□□□ -2.02
SNED1Q8TER0 MIR5089-201ENST00000580047 84 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
SNED1Q8TER0 WWP1P1-201ENST00000466609 2769 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-37P-201ENST00000362692 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-1167P-201ENST00000363227 94 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-11P-201ENST00000364234 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-25P-201ENST00000383873 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-48P-201ENST00000384161 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-16P-201ENST00000384385 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-15P-201ENST00000384534 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-29P-201ENST00000384637 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 MIR625-201ENST00000385047 85 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AL513475.1-201ENST00000406602 315 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 MIR1302-6-201ENST00000408466 90 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AL096701.2-201ENST00000416920 238 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 CR769767.1-201ENST00000436337 346 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RPS15AP7-201ENST00000439294 405 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AC009296.1-201ENST00000443146 155 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU7-4P-201ENST00000516961 62 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-1315P-201ENST00000517187 99 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AC144568.1-201ENST00000520139 137 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 TRAV32-201ENST00000553993 340 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AL157871.3-201ENST00000557231 293 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AC006600.1-201ENST00000572529 153 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms