Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC097478.2-201ENST00000610572 514 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 MIR6079-201ENST00000635807 62 ntBASIC-0.29□□□□□ -2.46
SPTSSBQ8NFR3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AP000568.1-201ENST00000282964 442 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 U3.4-201ENST00000363352 213 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-621P-201ENST00000364752 109 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 SNORD111-201ENST00000408139 94 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AL133396.1-201ENST00000432048 687 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 MTND1P32-201ENST00000433043 938 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RN7SL429P-201ENST00000479090 223 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RN7SL489P-201ENST00000486185 223 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RN7SL327P-201ENST00000488659 223 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AC104136.1-201ENST00000512969 394 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-405P-201ENST00000516637 110 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RNU1-142P-201ENST00000516682 145 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-467P-201ENST00000517027 110 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AC026616.1-201ENST00000523157 525 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 DEFB131C-201ENST00000528817 165 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 MIR6504-201ENST00000613520 61 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 RN7SL853P-201ENST00000617250 223 ntBASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPTSSBQ8NFR3 SNORD114-26-201ENST00000363543 72 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RNA5SP517-201ENST00000364724 117 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RNY3P13-201ENST00000365542 102 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-424P-201ENST00000384367 105 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 SNORA11-201ENST00000408789 128 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC016717.1-201ENST00000448918 286 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 MTND2P30-201ENST00000456663 382 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RPS3AP17-201ENST00000472594 777 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 RNU7-128P-201ENST00000517247 62 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 OR8K2P-201ENST00000524645 927 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC112693.2-201ENST00000556538 232 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 MIR4452-201ENST00000583004 71 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 MIR4753-201ENST00000585119 83 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 Z99289.3-201ENST00000605586 594 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC144521.1-201ENST00000607148 956 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AL359075.3-201ENST00000613288 217 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 MIR6718-201ENST00000616153 80 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC007742.2-201ENST00000618226 398 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AP002782.1-201ENST00000623107 614 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 AC004808.1-201ENST00000627671 721 ntBASIC-0.31□□□□□ -2.46
SPTSSBQ8NFR3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-371P-201ENST00000364283 108 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-692P-201ENST00000384496 107 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 RNU2-62P-201ENST00000410868 191 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 SNORD71-201ENST00000411292 86 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC019070.1-201ENST00000415008 1024 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 CDK8P2-201ENST00000415020 547 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 MTATP6P16-201ENST00000434543 526 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 RPL37P21-201ENST00000435890 276 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 ELOCP24-201ENST00000456370 334 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 LRRC34P2-201ENST00000514850 553 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC074133.1-201ENST00000515696 183 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 SNORA25.12-201ENST00000516202 82 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 MIR5697-201ENST00000578045 78 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC092574.1-201ENST00000609771 420 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 AC022709.1-201ENST00000615967 87 ntBASIC-0.32□□□□□ -2.46
SPTSSBQ8NFR3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 RNU6V-201ENST00000384105 107 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AC016909.1-201ENST00000415916 166 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AC005002.2-201ENST00000438228 269 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 SNORA59A-201ENST00000459326 152 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 7SK.7-201ENST00000603504 247 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AC064807.4-201ENST00000607201 407 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AL359697.1-201ENST00000624879 587 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 AC010487.4-201ENST00000637027 61 ntBASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.33□□□□□ -2.46
SPTSSBQ8NFR3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 SNORD118-201ENST00000363593 134 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 MIR549A-201ENST00000385268 96 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU2-3P-201ENST00000410144 191 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-994P-201ENST00000410507 111 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-293P-201ENST00000411259 106 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 MTND1P20-201ENST00000430341 950 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 AC004854.1-201ENST00000440356 349 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 AC010469.2-201ENST00000496412 480 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms