Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AK3P2-201ENST00000507976 429 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 RNU2-46P-201ENST00000517038 113 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AC090572.1-201ENST00000519251 160 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 DEFB131C-201ENST00000528817 165 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 MIR4753-201ENST00000585119 83 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AC112191.3-201ENST00000604371 277 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AP001836.1-201ENST00000604675 523 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 AP002371.2-201ENST00000624450 503 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 SNORA43.4-201ENST00000629559 138 ntBASIC0.5□□□□□ -2.33
ZNF439Q8NDP4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RNU5E-5P-201ENST00000365379 116 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RNU6-17P-201ENST00000384245 107 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RNU6-18P-201ENST00000384527 107 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 RPS3AP1-201ENST00000413190 320 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC004854.1-201ENST00000440356 349 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 USP9YP12-201ENST00000450481 570 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC079382.1-201ENST00000493346 557 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AL929325.1-201ENST00000603096 117 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 MIR6788-201ENST00000618842 66 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 AC022418.1-201ENST00000624118 445 ntBASIC0.49□□□□□ -2.33
ZNF439Q8NDP4 MTND4P9-201ENST00000507819 1346 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RNU6-500P-201ENST00000362349 107 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RNA5SP361-201ENST00000362686 118 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 Y_RNA.367-201ENST00000365544 101 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 MIR200A-201ENST00000384875 90 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RPL21P1-201ENST00000399532 476 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RNU4-46P-201ENST00000410818 138 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AC090960.1-201ENST00000421072 306 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 HMGN2P34-201ENST00000437647 269 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AC079781.2-201ENST00000446424 169 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RPS29P1-201ENST00000465274 159 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AC010486.2-201ENST00000505572 483 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 SNORD79.1-201ENST00000516069 84 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 RNU6-410P-201ENST00000517006 107 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AP003072.2-201ENST00000527756 676 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AL121579.1-201ENST00000555129 305 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AC103996.1-201ENST00000555468 102 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 AL513534.2-201ENST00000603836 250 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 uc_338.11-201ENST00000619132 160 ntBASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.48□□□□□ -2.33
ZNF439Q8NDP4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-827P-201ENST00000365553 106 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-434P-201ENST00000384376 107 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-393P-201ENST00000384475 107 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNA5SP109-201ENST00000391010 116 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-1093P-201ENST00000391194 107 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 RNU6-195P-201ENST00000411352 109 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 MTCO2P8-201ENST00000412213 658 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC098592.1-201ENST00000419352 333 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL596276.1-201ENST00000434465 418 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC073614.1-201ENST00000438690 650 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL606517.2-201ENST00000442855 241 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC016717.1-201ENST00000448918 286 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL031274.1-201ENST00000450334 232 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 BET1P1-201ENST00000482276 359 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 Vault.3-201ENST00000516676 95 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 SNORA25.17-201ENST00000517184 124 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC016256.1-201ENST00000547971 354 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC026470.2-201ENST00000561492 181 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 MIR4775-201ENST00000581168 75 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 MIR151B-201ENST00000584249 96 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AP000240.1-201ENST00000609910 452 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AL133173.2-201ENST00000614270 90 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 MIR7844-201ENST00000616161 122 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF439Q8NDP4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms