Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.136-201ENST00000363444 102 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.179-201ENST00000363844 90 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 RNU6-923P-201ENST00000364753 107 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 SNORA67.4-201ENST00000384688 142 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 MIR549A-201ENST00000385268 96 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AL513328.1-201ENST00000446460 224 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 UQCRBP2-201ENST00000447827 297 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 SNORA31.16-201ENST00000516773 139 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC055872.1-201ENST00000570978 278 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC090897.2-201ENST00000581715 130 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AL078605.1-201ENST00000603529 500 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AL590240.4-201ENST00000616908 390 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC048347.1-201ENST00000624621 427 ntBASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LINC00116Q8NCU8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 RNU6-859P-201ENST00000362728 107 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 MIR887-201ENST00000401258 79 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 RPS26P42-201ENST00000413485 326 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AL606753.1-201ENST00000427435 87 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC009237.7-201ENST00000447357 229 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC005042.3-201ENST00000453230 174 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 RNU6-625P-201ENST00000459412 107 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC090525.1-201ENST00000479116 478 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 RNY3P16-201ENST00000516338 101 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC233702.2-202ENST00000562547 291 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 MZT1P2-201ENST00000604387 248 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC022441.3-201ENST00000605737 136 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 AC005828.6-201ENST00000606610 232 ntBASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LINC00116Q8NCU8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.233-201ENST00000364407 101 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 RNU6-622P-201ENST00000384272 103 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.498-201ENST00000384460 102 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 SNORA26.3-201ENST00000391119 136 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 RNU6-918P-201ENST00000391219 106 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AL138827.1-201ENST00000402666 306 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AP001324.2-201ENST00000461163 319 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC008413.1-201ENST00000511864 177 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 CYCSP23-201ENST00000519781 313 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC018448.1-201ENST00000552843 316 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 MIR3609-201ENST00000582661 80 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 HMGN2P15-201ENST00000585707 270 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC068831.7-201ENST00000616954 363 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC073349.3-201ENST00000617616 186 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AC132825.6-201ENST00000638861 357 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 AL109809.4-201ENST00000603520 2185 ntBASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LINC00116Q8NCU8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AC008725.1-201ENST00000605123 2263 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.308-201ENST00000365043 101 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 RNU6-487P-201ENST00000365430 104 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.597-201ENST00000410463 100 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AL161651.1-201ENST00000440882 223 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AC091021.1-201ENST00000468051 388 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AC115990.1-201ENST00000526957 301 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AC025946.2-201ENST00000603398 234 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 AL590808.1-201ENST00000618696 141 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 U6.106-201ENST00000636360 105 ntBASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00116Q8NCU8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 Y_RNA.170-201ENST00000363746 110 ntBASIC3.61□□□□□ -1.83
LINC00116Q8NCU8 SNORA70B-201ENST00000384210 135 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms