Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 TPRKBP2-201ENST00000565969 475 ntBASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 AC013412.1-201ENST00000610687 192 ntBASIC1.92□□□□□ -2.1
LSMEM1Q8N8F7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 ZNF204P-201ENST00000416749 2397 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC010615.1-201ENST00000594254 1764 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 Y_RNA.89-201ENST00000363031 102 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 Y_RNA.135-201ENST00000363439 95 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 SNORD115-32-201ENST00000364079 82 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 SNORD116-11-201ENST00000383882 92 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 MTND4LP16-201ENST00000440828 295 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 MTND1P11-201ENST00000456661 876 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 MIR3672-201ENST00000584290 82 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AL353149.1-201ENST00000610667 244 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC009318.2-201ENST00000610917 651 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AC093783.1-201ENST00000612976 329 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 AL078596.1-201ENST00000624856 447 ntBASIC1.91□□□□□ -2.1
LSMEM1Q8N8F7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LSMEM1Q8N8F7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
LSMEM1Q8N8F7 Y_RNA.3-201ENST00000362331 103 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SNORD50.1-201ENST00000362987 71 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 Y_RNA.212-201ENST00000364177 102 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SNORA72.2-201ENST00000365028 127 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 Y_RNA.453-201ENST00000384223 109 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 MIR32-201ENST00000384965 70 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 MIR153-2-201ENST00000385225 87 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 AL590632.1-201ENST00000424289 371 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 UBE2V1P8-201ENST00000437166 265 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 AC093913.1-201ENST00000614178 329 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SCARNA15.3-201ENST00000626315 122 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SCARNA4.1-201ENST00000628597 123 ntBASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LSMEM1Q8N8F7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 RNU4-82P-201ENST00000362443 140 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 RNU6-137P-201ENST00000363680 108 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 RNU6-541P-201ENST00000384709 110 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 MIR515-2-201ENST00000384883 83 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 MIR515-1-201ENST00000384884 83 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 MIR1267-201ENST00000408723 78 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 AC079354.2-201ENST00000453523 154 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.89□□□□□ -2.11
LSMEM1Q8N8F7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 RNU6-296P-201ENST00000384608 107 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 Y_RNA.554-201ENST00000384672 102 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 SNORD116-4-201ENST00000384733 96 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR634-201ENST00000385208 97 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR1253-201ENST00000408273 105 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 AC060773.1-201ENST00000421698 310 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 AC099677.2-201ENST00000436385 175 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 snoU13.30-201ENST00000458951 104 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 HMGN2P9-201ENST00000476875 229 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 RNA5SP384-201ENST00000516615 116 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR4273-201ENST00000582824 84 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 SNORD11B-201ENST00000607707 90 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 AC090617.10-201ENST00000624308 134 ntBASIC1.88□□□□□ -2.11
LSMEM1Q8N8F7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
LSMEM1Q8N8F7 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms