Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1010P-201ENST00000362757 107 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-879P-201ENST00000364328 108 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.276-201ENST00000364732 109 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-806P-201ENST00000365147 105 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-713P-201ENST00000384761 107 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 U3.26-201ENST00000391236 204 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 EIF1P2-201ENST00000428233 350 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AL731563.1-201ENST00000442202 214 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC112771.1-201ENST00000463581 102 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP367-201ENST00000516557 118 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 RNU6-58P-201ENST00000517143 103 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC027288.2-201ENST00000553028 243 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC125232.2-201ENST00000592457 143 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AL138963.2-201ENST00000605137 226 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC010205.1-201ENST00000616668 449 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 MIR8062-201ENST00000621515 85 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 SNORD98-201ENST00000636377 67 ntBASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLIP4Q8N3C7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.19-201ENST00000362462 99 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 SNORD56.5-201ENST00000364281 72 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU6-611P-201ENST00000384276 104 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.556-201ENST00000384677 113 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU1-139P-201ENST00000391307 165 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU6-130P-201ENST00000411112 103 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 AL445305.1-201ENST00000432577 575 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RN7SKP132-201ENST00000516001 208 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU6-567P-201ENST00000516746 107 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 UBL5P4-201ENST00000562584 236 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 MIR3136-201ENST00000583498 78 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 uc_338.14-201ENST00000613162 166 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 AC005296.1-201ENST00000616145 209 ntBASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CLIP4Q8N3C7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNU6-137P-201ENST00000363680 108 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.183-201ENST00000363882 113 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 MIR10B-201ENST00000385011 110 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP213-201ENST00000391031 106 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNU6-159P-201ENST00000391080 106 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 SDAD1P3-201ENST00000427380 333 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 Z98742.2-201ENST00000431564 187 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 PCNPP5-201ENST00000452246 481 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 HMGB1P35-201ENST00000503360 598 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 AC067942.3-201ENST00000512025 362 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1143P-201ENST00000516125 104 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 PRELID2P1-201ENST00000552837 301 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 MIR5695-201ENST00000579717 85 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 AC130454.1-201ENST00000622948 401 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 MIR7515-201ENST00000637837 67 ntBASIC2.41□□□□□ -2.02
CLIP4Q8N3C7 AL109809.4-201ENST00000603520 2185 ntBASIC2.4□□□□□ -2.02
CLIP4Q8N3C7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CLIP4Q8N3C7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.02
CLIP4Q8N3C7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 RNU6-926P-201ENST00000384075 107 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 RNU6-281P-201ENST00000384212 103 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 RNU6-318P-201ENST00000384283 103 ntBASIC2.4□□□□□ -2.03
CLIP4Q8N3C7 MIR186-201ENST00000384988 86 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms