Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-546P-201ENST00000383991 107 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 SNORA12-201ENST00000391162 147 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 MIR320B2-201ENST00000408479 138 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.639-201ENST00000458981 102 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 RN7SL636P-201ENST00000497504 294 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 RNU7-4P-201ENST00000516961 62 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 FO624990.1-201ENST00000636373 85 ntBASIC2.26□□□□□ -2.05
BEST3Q8N1M1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
BEST3Q8N1M1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.813-201ENST00000364639 102 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 RNU6-26P-201ENST00000383985 107 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.428-201ENST00000384078 102 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 RNU2-32P-201ENST00000411193 191 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 RNU7-26P-201ENST00000458980 63 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AC090096.1-201ENST00000489168 390 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 ANXA2P1-201ENST00000505539 926 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 RNU6-58P-201ENST00000517143 103 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 SNORD116.3-201ENST00000517176 78 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 CBX3P7-201ENST00000532876 502 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AC027288.2-201ENST00000553028 243 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AC026470.2-201ENST00000561492 181 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 AC090517.1-201ENST00000569307 266 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 MIR4446-201ENST00000578505 67 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 SNRPGP20-201ENST00000604477 205 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 BX322639.1-202ENST00000423987 2213 ntBASIC2.25□□□□□ -2.05
BEST3Q8N1M1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.25□□□□□ -2.05
BEST3Q8N1M1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MIR369-201ENST00000362155 70 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.106-201ENST00000363189 100 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RNU1-23P-201ENST00000363361 144 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RNA5SP393-201ENST00000363423 117 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RNU5F-3P-201ENST00000363767 117 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MTCO2P12-201ENST00000427426 682 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 RPS12P2-201ENST00000439728 269 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AL035666.1-201ENST00000446195 348 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.701-201ENST00000516812 110 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC144568.1-201ENST00000520139 137 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC021269.2-201ENST00000532318 330 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC022616.8-201ENST00000533569 253 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AC016727.2-201ENST00000603988 621 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 AL049779.4-201ENST00000604500 156 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MIR1244-1-201ENST00000612829 85 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MIR1244-3-201ENST00000635744 85 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MIR1244-2-201ENST00000636449 85 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 MIR1244-4-202ENST00000636813 85 ntBASIC2.24□□□□□ -2.05
BEST3Q8N1M1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BEST3Q8N1M1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.5-201ENST00000362334 102 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 SNORA38-201ENST00000363946 132 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 MIR487A-201ENST00000385009 80 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 RNU6-159P-201ENST00000391080 106 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 SNORA3.2-201ENST00000408221 125 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC018865.2-201ENST00000423631 129 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 USP9YP16-201ENST00000430287 407 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AL137792.2-201ENST00000443484 235 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 USP9YP23-201ENST00000455085 407 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 RNU7-87P-201ENST00000459343 62 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC105758.1-201ENST00000506038 399 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC091144.1-201ENST00000519573 138 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC090617.3-201ENST00000573670 475 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms