Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU2-48P-201ENST00000410694 191 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 RPL21P111-201ENST00000418453 477 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 PMCHL2-203ENST00000457791 237 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 MTND5P5-201ENST00000503764 376 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 MIR1248-201ENST00000629190 106 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC60Q8IWA6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CCDC60Q8IWA6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC60Q8IWA6 RNU6-1159P-201ENST00000362933 107 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 SNORD50.1-201ENST00000362987 71 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 RNU6-1059P-201ENST00000363752 98 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AL358453.1-201ENST00000422522 250 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 RPS3AP52-201ENST00000435639 297 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 FO393415.2-201ENST00000480085 343 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AF186996.7-201ENST00000492781 209 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2□□□□□ -2.09
CCDC60Q8IWA6 AC046134.1-201ENST00000514454 666 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 RNU6-250P-201ENST00000516958 103 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AC016256.1-201ENST00000547971 354 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 EIF4A1P12-201ENST00000551910 141 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
CCDC60Q8IWA6 AP000654.2-201ENST00000605633 586 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AL132822.1-201ENST00000617063 513 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AL162373.1-201ENST00000620433 407 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AC099654.14-201ENST00000638599 341 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
CCDC60Q8IWA6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CCDC60Q8IWA6 RNU6-845P-201ENST00000362578 103 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 RNU5B-2P-201ENST00000363036 113 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 Y_RNA.184-201ENST00000363884 108 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 RNU6-26P-201ENST00000383985 107 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 RNU6-611P-201ENST00000384276 104 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 Y_RNA.473-201ENST00000384333 102 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AL627390.1-201ENST00000396055 340 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 USP9YP30-201ENST00000430729 455 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 PRELID3BP1-201ENST00000457142 540 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC087477.1-201ENST00000465747 340 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC005741.1-201ENST00000511094 432 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC090517.1-201ENST00000569307 266 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC026271.5-201ENST00000577873 130 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 RBM11P1-201ENST00000604951 799 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.99□□□□□ -2.09
CCDC60Q8IWA6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 MTND5P9-201ENST00000503854 1755 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 MIR548K-201ENST00000408406 116 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC074085.1-201ENST00000413598 418 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC107399.1-201ENST00000451226 265 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AL137159.1-201ENST00000452808 512 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC079354.2-201ENST00000453523 154 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC116353.2-201ENST00000505332 712 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC103851.1-201ENST00000506833 274 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 MIR4273-201ENST00000582824 84 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 uc_338.5-201ENST00000611839 155 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 SDR42E1P4-201ENST00000620894 481 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 DUXAP9-208ENST00000622815 614 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
CCDC60Q8IWA6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 MIR549A-201ENST00000385268 96 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
CCDC60Q8IWA6 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms