Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC130509.1-201ENST00000464158 433 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC087477.1-201ENST00000465747 340 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 RNU6-612P-201ENST00000516909 102 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC104383.1-201ENST00000530297 370 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 RRN3P3-201ENST00000549207 578 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AL118558.2-201ENST00000556294 238 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC092747.3-201ENST00000603769 301 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC103705.1-201ENST00000619013 241 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC091812.1-201ENST00000432235 1948 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC009541.1-201ENST00000438279 2662 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU4-66P-201ENST00000365199 138 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 Y_RNA.378-201ENST00000365652 113 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 SNORA32.2-201ENST00000384049 122 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU6-38P-201ENST00000384085 107 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC012306.1-201ENST00000423267 114 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC139712.2-201ENST00000424302 339 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC007547.1-201ENST00000462177 490 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 TOMM22P6-201ENST00000465035 409 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC083798.1-201ENST00000472671 131 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 RNU6-323P-201ENST00000521915 107 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC025423.5-201ENST00000550230 219 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC064836.2-201ENST00000609491 462 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
CDKL3Q8IVW4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-82P-201ENST00000363970 107 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1322P-201ENST00000364309 107 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU4-20P-201ENST00000365601 151 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 SNORA69-201ENST00000383895 132 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1042P-201ENST00000384204 107 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-261P-201ENST00000459506 102 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNA5SP445-201ENST00000515889 115 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1069P-201ENST00000516612 133 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-405P-201ENST00000516637 110 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC087854.1-201ENST00000519706 414 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC104576.1-201ENST00000524225 88 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC090517.1-201ENST00000569307 266 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AP005136.1-201ENST00000579765 429 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC009994.1-201ENST00000606889 253 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC064807.4-201ENST00000607201 407 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AL357078.3-201ENST00000607528 618 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AL121757.2-201ENST00000611223 313 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC005520.5-201ENST00000613926 164 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AC068792.1-201ENST00000621354 417 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 AL136221.1-201ENST00000621449 509 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 MIR6863-201ENST00000636112 90 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 MTND5P26-201ENST00000426018 1752 ntBASIC1.24□□□□□ -2.21
CDKL3Q8IVW4 RNU6-227P-201ENST00000362865 103 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 RNU6-414P-201ENST00000363705 104 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 RNU6-392P-201ENST00000364926 101 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 SNORD31B-201ENST00000364977 69 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 SNORD116-1-201ENST00000384335 95 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 MTND3P9-201ENST00000429526 346 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 snoU13.6-201ENST00000458785 104 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 RPS29P27-201ENST00000463711 170 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 RPL36AP21-201ENST00000490372 323 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AC097473.1-201ENST00000508142 408 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AC025465.4-201ENST00000513422 638 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 DEFB131C-201ENST00000528817 165 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 MIR5692C1-201ENST00000585309 91 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 AL158209.2-201ENST00000619266 216 ntBASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CDKL3Q8IVW4 MTND5P9-201ENST00000503854 1755 ntBASIC1.22□□□□□ -2.21
CDKL3Q8IVW4 RNU1-76P-201ENST00000362903 159 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms