Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC138907.4-201ENST00000570107 226 ntBASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 MIR378D2-201ENST00000580636 98 ntBASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 MIR5195-201ENST00000583555 115 ntBASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 AC004832.5-201ENST00000608677 401 ntBASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SH3RF1Q7Z6J0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNU4-15P-201ENST00000362613 141 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-1010P-201ENST00000362757 107 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 SNORD45.3-201ENST00000363836 72 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNA5SP72-201ENST00000364442 117 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-1082P-201ENST00000364574 107 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 MIR634-201ENST00000385208 97 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 SNRPGP5-201ENST00000456003 220 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 snoU13.14-201ENST00000459372 104 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 AC145146.1-201ENST00000496370 254 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 AC104619.4-201ENST00000510773 249 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNU2-58P-201ENST00000516403 183 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNU7-115P-201ENST00000516433 55 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 RNA5SP179-201ENST00000517284 121 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 AC120024.3-201ENST00000603167 156 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 uc_338.28-201ENST00000612082 187 ntBASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.43□□□□□ -1.7
SH3RF1Q7Z6J0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-529P-201ENST00000363383 104 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-1080P-201ENST00000383982 107 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-880P-201ENST00000384526 107 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 AL512604.1-201ENST00000404812 257 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 CYCSP49-201ENST00000420810 319 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 RPS4XP2-201ENST00000458402 793 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 AC006445.2-201ENST00000510061 472 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 SNORD19.2-201ENST00000516978 73 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 RNU6-762P-201ENST00000517107 102 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 AC093331.1-201ENST00000521474 169 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 HMGN2P15-201ENST00000585707 270 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 AC091167.4-201ENST00000605079 184 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 AC099778.2-201ENST00000610904 211 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 MIR7975-201ENST00000619350 68 ntBASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF1Q7Z6J0 Z82217.1-201ENST00000625157 8149 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 RNA5SP322-201ENST00000363617 119 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 AL035423.1-201ENST00000420331 213 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 SCARNA14-201ENST00000516903 136 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 HSPE1P18-201ENST00000517602 280 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 AC005000.2-201ENST00000605468 310 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 U3.45-201ENST00000607547 219 ntBASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF1Q7Z6J0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SH3RF1Q7Z6J0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 Y_RNA.40-201ENST00000362645 93 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 RNU6-640P-201ENST00000363693 105 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 Y_RNA.348-201ENST00000365403 103 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 RNU1-89P-201ENST00000384592 164 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 Y_RNA.558-201ENST00000384685 113 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 MIR548B-201ENST00000385247 97 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 AC006028.1-201ENST00000438379 402 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 RNU6-1061P-201ENST00000516530 99 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 AC091152.3-201ENST00000604227 325 ntBASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.4□□□□□ -1.71
SH3RF1Q7Z6J0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3RF1Q7Z6J0 SNORD114-7-201ENST00000362520 77 ntBASIC4.39□□□□□ -1.71
SH3RF1Q7Z6J0 RNU6-1305P-201ENST00000364353 104 ntBASIC4.39□□□□□ -1.71
SH3RF1Q7Z6J0 SNORD58C-201ENST00000365223 64 ntBASIC4.39□□□□□ -1.71
SH3RF1Q7Z6J0 SNORA20B-201ENST00000384220 132 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms