Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU4-10P-201ENST00000364383 140 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 SNORA62.3-201ENST00000365110 153 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AL162725.1-201ENST00000435405 301 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC146507.2-201ENST00000460608 476 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC112771.1-201ENST00000463581 102 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 RNU2-44P-201ENST00000516795 194 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC136628.3-201ENST00000521868 290 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 MIR7153-201ENST00000637758 57 ntBASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RNF111Q6ZNA4 AC010329.5-201ENST00000623497 2174 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC068700.1-201ENST00000565862 3754 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNU6-151P-201ENST00000364158 107 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RNU6-381P-201ENST00000391259 108 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 SNORA11-201ENST00000408789 128 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 RN7SKP27-201ENST00000410684 333 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC021269.2-201ENST00000532318 330 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 MIR1254-2-201ENST00000579553 63 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 AC006133.1-201ENST00000617106 264 ntBASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF111Q6ZNA4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNA5SP51-201ENST00000364750 119 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNU6-275P-201ENST00000364910 107 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNA5SP252-201ENST00000391131 119 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 SNORA12-201ENST00000391162 147 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNU2-51P-201ENST00000410708 197 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 SNORA84-201ENST00000459229 133 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AC091179.1-201ENST00000461606 579 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNA5SP272-201ENST00000516095 111 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNU6-426P-201ENST00000516464 97 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AC025281.1-201ENST00000567026 265 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AL391813.1-201ENST00000603098 260 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AL078604.3-201ENST00000615580 211 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 AC013791.1-201ENST00000616619 62 ntBASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF111Q6ZNA4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 RNU6-22P-201ENST00000384355 107 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 RNU6-959P-201ENST00000384671 107 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 RNU6-417P-201ENST00000384712 107 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 PTMAP2-201ENST00000397627 327 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 TOMM22P2-201ENST00000430735 237 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 HMGN2P7-201ENST00000456186 273 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC005840.1-201ENST00000498412 377 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC069294.1-201ENST00000608397 350 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AL138880.2-201ENST00000616214 239 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC039056.2-201ENST00000622261 511 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF111Q6ZNA4 AC069528.2-201ENST00000624849 1991 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms