Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
E4F1Q66K89 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
E4F1Q66K89 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
E4F1Q66K89 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
E4F1Q66K89 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
E4F1Q66K89 AC073325.2-201ENST00000339545 159 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 Y_RNA.101-201ENST00000363154 102 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 Y_RNA.150-201ENST00000363562 102 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 Y_RNA.415-201ENST00000384012 112 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 SNORA46.1-201ENST00000391069 153 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 RNU6-651P-201ENST00000411040 105 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
E4F1Q66K89 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.37□□□□□ -1.87
E4F1Q66K89 HMGN2P20-201ENST00000437531 273 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 MTND2P29-201ENST00000438595 412 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.37□□□□□ -1.87
E4F1Q66K89 RPS3P1-201ENST00000456781 192 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 RNU6-155P-201ENST00000516347 100 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 RNU6-966P-201ENST00000516479 104 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AC024405.2-202ENST00000532731 184 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 MIR5006-201ENST00000583027 110 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AL590240.4-201ENST00000616908 390 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AC005562.2-201ENST00000618264 111 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 AL161912.2-201ENST00000565707 3007 ntBASIC3.37□□□□□ -1.87
E4F1Q66K89 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
E4F1Q66K89 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.36□□□□□ -1.87
E4F1Q66K89 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
E4F1Q66K89 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
E4F1Q66K89 Y_RNA.270-201ENST00000364693 104 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 Y_RNA.275-201ENST00000364726 110 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 SNORA18.2-201ENST00000383865 132 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 RNA5SP475-201ENST00000410568 110 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.36□□□□□ -1.87
E4F1Q66K89 AC004386.2-201ENST00000441858 148 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AL358232.1-201ENST00000448030 501 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 Y_RNA.644-201ENST00000459006 113 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 Y_RNA.674-201ENST00000516362 113 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 RNU1-117P-201ENST00000517041 158 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AC079598.5-201ENST00000547460 117 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AC026470.2-201ENST00000561492 181 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AC034105.4-201ENST00000568304 277 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.36□□□□□ -1.87
E4F1Q66K89 MIR3145-201ENST00000580727 82 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AL512605.2-201ENST00000592972 256 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 AL670379.2-201ENST00000604983 252 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
E4F1Q66K89 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
E4F1Q66K89 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
E4F1Q66K89 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
E4F1Q66K89 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
E4F1Q66K89 AC069528.2-201ENST00000624849 1991 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 MIR411-201ENST00000362239 96 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 RNA5SP50-201ENST00000363731 107 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 SNORA14A-201ENST00000364773 135 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 RNU6-1062P-201ENST00000383908 107 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 RNU6-1310P-201ENST00000384153 107 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 SNORA12-201ENST00000391162 147 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 AL590004.2-201ENST00000404787 371 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 RNU2-61P-201ENST00000411069 191 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 RNA5SP344-201ENST00000411081 104 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
E4F1Q66K89 AC009237.7-201ENST00000447357 229 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.35□□□□□ -1.87
E4F1Q66K89 SNORD116-28-201ENST00000516123 91 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 SNORA51-201ENST00000606420 132 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 TCL6_2.1-201ENST00000615162 119 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 FTX_2.1-201ENST00000618816 94 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 MIR6733-201ENST00000635723 61 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 MIR3674-201ENST00000636576 68 ntBASIC3.35□□□□□ -1.87
E4F1Q66K89 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.35□□□□□ -1.87
E4F1Q66K89 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
E4F1Q66K89 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E4F1Q66K89 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.34□□□□□ -1.87
E4F1Q66K89 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E4F1Q66K89 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
E4F1Q66K89 Y_RNA.122-201ENST00000363331 96 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 Y_RNA.136-201ENST00000363444 102 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 SNORD87-201ENST00000364849 89 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 Y_RNA.292-201ENST00000364904 97 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 RNU6-662P-201ENST00000384253 104 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 Y_RNA.555-201ENST00000384673 110 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 Y_RNA.626-201ENST00000411288 95 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AC004866.1-201ENST00000411748 78 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.34□□□□□ -1.87
E4F1Q66K89 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.34□□□□□ -1.87
E4F1Q66K89 AC097463.2-201ENST00000421074 142 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.34□□□□□ -1.87
E4F1Q66K89 AC091153.1-201ENST00000466297 402 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 RN7SL633P-201ENST00000488974 297 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.34□□□□□ -1.87
E4F1Q66K89 SNORA27.4-201ENST00000516650 95 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AP002001.1-203ENST00000534002 267 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.34□□□□□ -1.87
E4F1Q66K89 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms