Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 USP9YP11-201ENST00000427537 717 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 HMGN2P26-201ENST00000463169 339 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AC116562.3-201ENST00000506136 177 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNU6-927P-201ENST00000516199 100 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNA5SP117-201ENST00000365294 118 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 RNA5SP216-201ENST00000516111 123 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC011451.2-201ENST00000604303 598 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 MIR563-201ENST00000385080 79 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC007000.2-201ENST00000442564 487 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 USP9YP25-201ENST00000457708 443 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 RNU2-53P-201ENST00000516257 147 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 C1DP5-201ENST00000525775 383 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AL034555.1-201ENST00000604816 211 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 MIR1248-201ENST00000629190 106 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 TAF13P2-201ENST00000416876 286 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC007327.1-201ENST00000447461 264 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 RNU6-202P-201ENST00000515998 96 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC040926.1-201ENST00000530195 238 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 MIR499B-201ENST00000636498 73 ntBASIC-0.53□□□□□ -2.49
VPS13DQ5THJ4 AL109755.1-201ENST00000401791 649 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 SNORD83.1-201ENST00000411362 77 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC109327.2-201ENST00000448339 378 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC080078.2-201ENST00000603766 501 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC013476.2-201ENST00000614456 459 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AL603839.4-201ENST00000624658 1005 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 CBX3P9-201ENST00000402326 552 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 TPMTP2-201ENST00000414372 726 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 MIR548AD-201ENST00000584780 82 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 VN1R83P-201ENST00000595685 445 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AL671309.1-201ENST00000603750 544 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC107075.1-201ENST00000613695 314 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-369P-201ENST00000362515 102 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-529P-201ENST00000363383 104 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-652P-201ENST00000365488 107 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-116P-201ENST00000384042 109 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-975P-201ENST00000384296 105 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 MIR660-201ENST00000385235 97 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RPS15AP10-201ENST00000432472 382 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC023512.1-201ENST00000444513 499 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 HMGN3P1-201ENST00000453847 193 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AC093519.1-201ENST00000566109 298 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 SUMO2P14-201ENST00000604488 293 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 AL365184.2-201ENST00000431139 435 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 MRPS10P2-201ENST00000431226 381 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-840P-201ENST00000517275 65 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.54□□□□□ -2.5
VPS13DQ5THJ4 RNU6-655P-201ENST00000362858 107 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RNU6-331P-201ENST00000384724 107 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 DEFB130D-201ENST00000426866 237 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AP002001.1-203ENST00000534002 267 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 MIR4306-201ENST00000583390 91 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC016542.1-201ENST00000608259 493 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC004067.1-201ENST00000608733 700 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RNU6-441P-201ENST00000384545 106 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RNU2-15P-201ENST00000410692 191 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AL356583.2-201ENST00000426536 280 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 RPL32P14-201ENST00000463196 378 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 FCF1P10-201ENST00000407590 479 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC013828.1-201ENST00000481845 158 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.55□□□□□ -2.5
VPS13DQ5THJ4 MIR377-201ENST00000362145 69 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MIR1303-201ENST00000408625 86 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MIR5695-201ENST00000579717 85 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MIR186-201ENST00000384988 86 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 HLA-S-202ENST00000425174 53 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms