Protein–RNA interactions for Protein: Q13449

LSAMP, Limbic system-associated membrane protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMPQ13449 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSAMPQ13449 U3.8-201ENST00000363675 217 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 SNORA70.2-201ENST00000364506 135 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 Y_RNA.464-201ENST00000384282 110 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 Y_RNA.625-201ENST00000411256 107 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 YME1L1P1-201ENST00000429435 297 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 TOMM22P2-201ENST00000430735 237 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 TBCAP1-201ENST00000436520 327 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
LSAMPQ13449 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.18□□□□□ -1.9
LSAMPQ13449 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
LSAMPQ13449 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSAMPQ13449 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 RNU6-1098P-201ENST00000516772 96 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
LSAMPQ13449 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LSAMPQ13449 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.18□□□□□ -1.9
LSAMPQ13449 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.18□□□□□ -1.9
LSAMPQ13449 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSAMPQ13449 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSAMPQ13449 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU6-1305P-201ENST00000364353 104 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU1-13P-201ENST00000384499 162 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 MIR548B-201ENST00000385247 97 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU6-918P-201ENST00000391219 106 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU6-493P-201ENST00000391321 108 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 AC109925.1-201ENST00000478069 331 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 SCARNA11.3-201ENST00000517276 130 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.17□□□□□ -1.9
LSAMPQ13449 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
LSAMPQ13449 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.17□□□□□ -1.9
LSAMPQ13449 AL365265.1-201ENST00000621045 234 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
LSAMPQ13449 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSAMPQ13449 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LSAMPQ13449 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.17□□□□□ -1.9
LSAMPQ13449 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSAMPQ13449 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LSAMPQ13449 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSAMPQ13449 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
LSAMPQ13449 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSAMPQ13449 SPRR2C-201ENST00000290702 219 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 RNU6-1272P-201ENST00000362776 107 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 SNORD115-30-201ENST00000364117 82 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 Y_RNA.262-201ENST00000364641 102 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 BTF3P11-201ENST00000426582 477 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 Z75741.1-201ENST00000446793 314 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.16□□□□□ -1.9
LSAMPQ13449 AC074198.2-201ENST00000508153 258 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.16□□□□□ -1.9
LSAMPQ13449 MIR449C-201ENST00000516047 92 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 AP005660.1-201ENST00000522972 293 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
LSAMPQ13449 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 AL008718.3-201ENST00000610217 321 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSAMPQ13449 MIR6500-201ENST00000622700 86 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 AC008873.1-201ENST00000625051 138 ntBASIC3.16□□□□□ -1.9
LSAMPQ13449 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSAMPQ13449 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSAMPQ13449 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LSAMPQ13449 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.9
LSAMPQ13449 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
LSAMPQ13449 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSAMPQ13449 RNU6-774P-201ENST00000363238 107 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 Y_RNA.233-201ENST00000364407 101 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 Y_RNA.304-201ENST00000365011 112 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 AL031003.1-201ENST00000404229 172 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 RN7SKP51-201ENST00000410781 304 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 OOSP1P1-201ENST00000423265 274 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 RN7SL385P-201ENST00000468873 276 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 MIR2116-201ENST00000517221 80 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSAMPQ13449 PARP1P2-201ENST00000556806 195 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
LSAMPQ13449 AC009127.3-201ENST00000570531 403 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSAMPQ13449 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.15□□□□□ -1.91
LSAMPQ13449 AC110774.1-201ENST00000623567 2018 ntBASIC3.15□□□□□ -1.91
LSAMPQ13449 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LSAMPQ13449 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.14□□□□□ -1.91
LSAMPQ13449 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSAMPQ13449 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSAMPQ13449 Y_RNA.243-201ENST00000364481 109 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 RNA5SP97-201ENST00000365006 84 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 RNU6-1274P-201ENST00000384557 107 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 MIR586-201ENST00000385035 97 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 MIR1294-201ENST00000408503 142 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 RNU6-1328P-201ENST00000410938 106 ntBASIC3.14□□□□□ -1.91
LSAMPQ13449 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms