Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU6-23P-201ENST00000363283 107 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 Y_RNA.123-201ENST00000363338 102 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU4-40P-201ENST00000364351 143 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-214P-201ENST00000384130 107 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 SNORA29-201ENST00000384183 140 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 U8.10-201ENST00000384260 133 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-160P-201ENST00000384591 107 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-1093P-201ENST00000391194 107 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 MTCO1P20-201ENST00000425366 358 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 USP9YP28-201ENST00000435142 589 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-237P-201ENST00000515985 71 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNVU1-2-201ENST00000516326 135 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU5F-4P-201ENST00000516581 114 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 RNU6-567P-201ENST00000516746 107 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGCS1Q01581 AC087441.2-201ENST00000529141 262 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGCS1Q01581 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGCS1Q01581 RMST_3.1-201ENST00000611651 109 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 AC130454.1-201ENST00000622948 401 ntBASIC1.38□□□□□ -2.19
HMGCS1Q01581 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 RNY3P3-201ENST00000363816 102 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 Y_RNA.256-201ENST00000364594 104 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 Y_RNA.554-201ENST00000384672 102 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 MIR549A-201ENST00000385268 96 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 RNU6-332P-201ENST00000391193 108 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC123900.1-201ENST00000420390 96 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 RNU7-14P-201ENST00000459331 62 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 U8.21-201ENST00000459536 136 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 HMGN2P26-201ENST00000463169 339 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 FO393415.2-201ENST00000480085 343 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 DEFB131C-201ENST00000528817 165 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC026371.1-201ENST00000551867 419 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC090517.1-201ENST00000569307 266 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 CPDP1-201ENST00000579660 283 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC100830.2-201ENST00000581636 240 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC022513.1-201ENST00000624512 117 ntBASIC1.37□□□□□ -2.19
HMGCS1Q01581 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGCS1Q01581 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HMGCS1Q01581 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 RNU6-661P-201ENST00000362409 107 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 RNU5B-2P-201ENST00000363036 113 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 SNORA18.2-201ENST00000383865 132 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 SNORA32.2-201ENST00000384049 122 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 MIR521-1-201ENST00000384902 87 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC139712.2-201ENST00000424302 339 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 AL035666.1-201ENST00000446195 348 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 RNU7-187P-201ENST00000458985 68 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC130509.1-201ENST00000464158 433 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 FAM206BP-201ENST00000510179 541 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC016957.1-201ENST00000534895 309 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 ZNF519P2-201ENST00000557032 169 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGCS1Q01581 MIR3976-201ENST00000606807 139 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC064807.4-201ENST00000607201 407 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 AC024614.3-201ENST00000637860 256 ntBASIC1.36□□□□□ -2.19
HMGCS1Q01581 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGCS1Q01581 Y_RNA.3-201ENST00000362331 103 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 RNU6-623P-201ENST00000363143 105 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 SNORD113-7-201ENST00000363762 77 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 RNU6-438P-201ENST00000365561 103 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 RNU6-338P-201ENST00000383888 105 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 SNORA48.1-201ENST00000390879 135 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 AL590632.1-201ENST00000424289 371 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 NDUFA5P4-201ENST00000436704 385 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 MTCO1P29-201ENST00000496868 288 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 MTND1P35-201ENST00000526739 508 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGCS1Q01581 AC146944.4-201ENST00000602697 718 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 AL136221.1-201ENST00000621449 509 ntBASIC1.35□□□□□ -2.19
HMGCS1Q01581 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNU1-76P-201ENST00000362903 159 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms