Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SNORA62.5-201ENST00000516634 120 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPS28P62857 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
RPS28P62857 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.17□□□□□ -2.44
RPS28P62857 EIF1P4-201ENST00000572664 335 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 PART1_2.1-201ENST00000612397 250 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AC005520.5-201ENST00000613926 164 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AC090517.2-201ENST00000614966 680 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AL589743.1-201ENST00000551932 2712 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AL390237.1-201ENST00000404226 1415 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 MIR32-201ENST00000384965 70 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 AL354692.1-201ENST00000423044 315 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
RPS28P62857 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPS28P62857 AC093019.1-201ENST00000443135 252 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 TRMT112P2-201ENST00000512910 132 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPS28P62857 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPS28P62857 DEFB131C-201ENST00000528817 165 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 AC123904.2-201ENST00000548059 300 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.18□□□□□ -2.44
RPS28P62857 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPS28P62857 MIR4300-201ENST00000581016 96 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 SNORA28-201ENST00000606769 126 ntBASIC-0.18□□□□□ -2.44
RPS28P62857 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPS28P62857 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPS28P62857 RNU6-37P-201ENST00000362692 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNY4P24-201ENST00000362735 96 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-11P-201ENST00000364234 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-371P-201ENST00000364283 108 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-25P-201ENST00000383873 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-1-201ENST00000383898 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-723P-201ENST00000383973 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-48P-201ENST00000384161 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-36P-201ENST00000384172 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-4P-201ENST00000384205 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-5P-201ENST00000384238 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-3P-201ENST00000384314 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-15P-201ENST00000384534 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-2-201ENST00000384627 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-29P-201ENST00000384637 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-9-201ENST00000384776 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-33P-201ENST00000384793 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RPS3AP3-201ENST00000411933 242 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.19□□□□□ -2.44
RPS28P62857 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPS28P62857 AC109479.2-201ENST00000517842 174 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPS28P62857 AP000942.3-201ENST00000603702 160 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 AL359821.1-201ENST00000605519 182 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 RNU6-6P-201ENST00000606623 107 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 snoU13.31-201ENST00000607291 104 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 AC012467.1-201ENST00000607740 256 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 AL356596.1-201ENST00000624230 379 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 U6.108-201ENST00000637764 58 ntBASIC-0.19□□□□□ -2.44
RPS28P62857 OR4G1P-203ENST00000641984 1631 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 SNORA42.1-201ENST00000363515 137 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNU4-67P-201ENST00000364569 141 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNU1-93P-201ENST00000364704 169 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 SNORA36A-201ENST00000384221 132 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 MIR936-201ENST00000401264 98 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNA5SP511-201ENST00000410487 115 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AP000275.1-201ENST00000411943 390 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC-0.2□□□□□ -2.44
RPS28P62857 AC010095.1-201ENST00000443543 144 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.2□□□□□ -2.44
RPS28P62857 snoU13.25-201ENST00000458945 104 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNA5SP227-201ENST00000516184 113 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNA5SP102-201ENST00000516865 106 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.2□□□□□ -2.44
RPS28P62857 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.2□□□□□ -2.44
RPS28P62857 AC004584.2-201ENST00000570407 410 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AC073539.2-201ENST00000597113 165 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AC121334.2-201ENST00000605387 271 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AC008250.2-201ENST00000615261 205 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 uc_338.34-201ENST00000617467 174 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 AC005562.2-201ENST00000618264 111 ntBASIC-0.2□□□□□ -2.44
RPS28P62857 RNU6-428P-201ENST00000362942 107 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 MIR1827-201ENST00000408549 66 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 RNU6-607P-201ENST00000411283 108 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 AL663109.1-201ENST00000411498 844 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 AC106883.1-201ENST00000418805 562 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 AC074133.1-201ENST00000515696 183 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 SNORA25.12-201ENST00000516202 82 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 MTATP6P3-201ENST00000581686 676 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC-0.21□□□□□ -2.44
RPS28P62857 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
RPS28P62857 MIR6079-201ENST00000635807 62 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 OR5AK4P-201ENST00000635912 903 ntBASIC-0.21□□□□□ -2.44
RPS28P62857 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
RPS28P62857 RNA5SP214-201ENST00000363378 118 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 5S_rRNA.2-201ENST00000391293 112 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 MTND3P20-201ENST00000407663 186 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 RNU2-3P-201ENST00000410144 191 ntBASIC-0.22□□□□□ -2.44
RPS28P62857 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms