Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.6□□□□□ -1.83
RTP1P59025 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.6□□□□□ -1.83
RTP1P59025 AL672296.1-201ENST00000427780 2158 ntBASIC3.6□□□□□ -1.83
RTP1P59025 BX322639.1-202ENST00000423987 2213 ntBASIC3.6□□□□□ -1.83
RTP1P59025 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.6□□□□□ -1.83
RTP1P59025 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTP1P59025 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.6□□□□□ -1.83
RTP1P59025 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTP1P59025 AC002546.1-201ENST00000588041 2504 ntBASIC3.6□□□□□ -1.83
RTP1P59025 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.83
RTP1P59025 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTP1P59025 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTP1P59025 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTP1P59025 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RTP1P59025 Y_RNA.435-201ENST00000384095 112 ntBASIC3.59□□□□□ -1.83
RTP1P59025 RNU6-622P-201ENST00000384272 103 ntBASIC3.59□□□□□ -1.83
RTP1P59025 RNU6-1135P-201ENST00000411083 103 ntBASIC3.59□□□□□ -1.83
RTP1P59025 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
RTP1P59025 RPL26P9-201ENST00000457466 433 ntBASIC3.59□□□□□ -1.83
RTP1P59025 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.59□□□□□ -1.83
RTP1P59025 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.59□□□□□ -1.83
RTP1P59025 NACAP3-201ENST00000552100 481 ntBASIC3.59□□□□□ -1.83
RTP1P59025 AC021739.1-201ENST00000559631 174 ntBASIC3.59□□□□□ -1.83
RTP1P59025 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
RTP1P59025 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.59□□□□□ -1.83
RTP1P59025 AC090897.2-201ENST00000581715 130 ntBASIC3.59□□□□□ -1.83
RTP1P59025 UBL5P2-201ENST00000583788 219 ntBASIC3.59□□□□□ -1.83
RTP1P59025 MIR3529-201ENST00000637713 78 ntBASIC3.59□□□□□ -1.83
RTP1P59025 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTP1P59025 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
RTP1P59025 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.59□□□□□ -1.83
RTP1P59025 ADAM3A-203ENST00000461344 2157 ntBASIC3.59□□□□□ -1.84
RTP1P59025 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RTP1P59025 ZNF204P-201ENST00000416749 2397 ntBASIC3.59□□□□□ -1.84
RTP1P59025 FAM35BP-202ENST00000497389 3337 ntBASIC3.59□□□□□ -1.84
RTP1P59025 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
RTP1P59025 MTND5P35-201ENST00000557537 1720 ntBASIC3.58□□□□□ -1.84
RTP1P59025 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RTP1P59025 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.58□□□□□ -1.84
RTP1P59025 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTP1P59025 AC110491.1-201ENST00000562191 2010 ntBASIC3.58□□□□□ -1.84
RTP1P59025 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTP1P59025 Y_RNA.101-201ENST00000363154 102 ntBASIC3.58□□□□□ -1.84
RTP1P59025 SNORD50.2-201ENST00000365465 70 ntBASIC3.58□□□□□ -1.84
RTP1P59025 Y_RNA.398-201ENST00000383952 99 ntBASIC3.58□□□□□ -1.84
RTP1P59025 RNA5SP390-201ENST00000410191 113 ntBASIC3.58□□□□□ -1.84
RTP1P59025 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.58□□□□□ -1.84
RTP1P59025 AC099548.1-201ENST00000421443 426 ntBASIC3.58□□□□□ -1.84
RTP1P59025 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.58□□□□□ -1.84
RTP1P59025 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.58□□□□□ -1.84
RTP1P59025 AC074133.1-201ENST00000515696 183 ntBASIC3.58□□□□□ -1.84
RTP1P59025 SNORA31.16-201ENST00000516773 139 ntBASIC3.58□□□□□ -1.84
RTP1P59025 AC018448.1-201ENST00000552843 316 ntBASIC3.58□□□□□ -1.84
RTP1P59025 GTF3AP2-201ENST00000557014 266 ntBASIC3.58□□□□□ -1.84
RTP1P59025 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.58□□□□□ -1.84
RTP1P59025 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.58□□□□□ -1.84
RTP1P59025 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTP1P59025 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
RTP1P59025 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RTP1P59025 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
RTP1P59025 RNA5SP295-201ENST00000362655 121 ntBASIC3.57□□□□□ -1.84
RTP1P59025 Y_RNA.179-201ENST00000363844 90 ntBASIC3.57□□□□□ -1.84
RTP1P59025 SNORA72.2-201ENST00000365028 127 ntBASIC3.57□□□□□ -1.84
RTP1P59025 MIR549A-201ENST00000385268 96 ntBASIC3.57□□□□□ -1.84
RTP1P59025 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RTP1P59025 AC019205.3-201ENST00000424573 156 ntBASIC3.57□□□□□ -1.84
RTP1P59025 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTP1P59025 CST9LP2-201ENST00000437612 320 ntBASIC3.57□□□□□ -1.84
RTP1P59025 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
RTP1P59025 RNU6-625P-201ENST00000459412 107 ntBASIC3.57□□□□□ -1.84
RTP1P59025 AC091826.1-201ENST00000514065 313 ntBASIC3.57□□□□□ -1.84
RTP1P59025 RNU6-191P-201ENST00000516295 94 ntBASIC3.57□□□□□ -1.84
RTP1P59025 ACA59.2-201ENST00000517061 156 ntBASIC3.57□□□□□ -1.84
RTP1P59025 AC006199.1-201ENST00000548728 219 ntBASIC3.57□□□□□ -1.84
RTP1P59025 MIR3145-201ENST00000580727 82 ntBASIC3.57□□□□□ -1.84
RTP1P59025 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
RTP1P59025 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
RTP1P59025 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTP1P59025 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTP1P59025 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
RTP1P59025 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.56□□□□□ -1.84
RTP1P59025 RBBP8P1-201ENST00000449447 1844 ntBASIC3.56□□□□□ -1.84
RTP1P59025 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTP1P59025 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTP1P59025 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTP1P59025 RNU4-80P-201ENST00000363200 141 ntBASIC3.56□□□□□ -1.84
RTP1P59025 RNU6-799P-201ENST00000363567 107 ntBASIC3.56□□□□□ -1.84
RTP1P59025 Y_RNA.262-201ENST00000364641 102 ntBASIC3.56□□□□□ -1.84
RTP1P59025 Y_RNA.304-201ENST00000365011 112 ntBASIC3.56□□□□□ -1.84
RTP1P59025 SNORA7.4-201ENST00000384249 137 ntBASIC3.56□□□□□ -1.84
RTP1P59025 EI24P2-201ENST00000397776 1076 ntBASIC3.56□□□□□ -1.84
RTP1P59025 RNU6-1199P-201ENST00000411249 104 ntBASIC3.56□□□□□ -1.84
RTP1P59025 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AC024067.1-201ENST00000426199 223 ntBASIC3.56□□□□□ -1.84
RTP1P59025 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.56□□□□□ -1.84
RTP1P59025 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.56□□□□□ -1.84
RTP1P59025 AC012308.1-201ENST00000451232 178 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.56□□□□□ -1.84
RTP1P59025 HMGN2P16-201ENST00000456802 261 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AC007215.1-201ENST00000464893 276 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms