Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC007494.3-201ENST00000624660 743 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 MIR338-201ENST00000636369 67 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN18P56856 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CLDN18P56856 MIR194-1-201ENST00000384892 85 ntBASIC1□□□□□ -2.25
CLDN18P56856 MIR222-201ENST00000384992 110 ntBASIC1□□□□□ -2.25
CLDN18P56856 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
CLDN18P56856 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1□□□□□ -2.25
CLDN18P56856 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
CLDN18P56856 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1□□□□□ -2.25
CLDN18P56856 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1□□□□□ -2.25
CLDN18P56856 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1□□□□□ -2.25
CLDN18P56856 AC016717.1-201ENST00000448918 286 ntBASIC1□□□□□ -2.25
CLDN18P56856 RN7SKP265-201ENST00000516448 223 ntBASIC1□□□□□ -2.25
CLDN18P56856 AC009094.1-201ENST00000564443 426 ntBASIC1□□□□□ -2.25
CLDN18P56856 AL050343.2-201ENST00000607338 280 ntBASIC1□□□□□ -2.25
CLDN18P56856 AL353149.1-201ENST00000610667 244 ntBASIC1□□□□□ -2.25
CLDN18P56856 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1□□□□□ -2.25
CLDN18P56856 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1□□□□□ -2.25
CLDN18P56856 AC009161.2-201ENST00000624626 138 ntBASIC1□□□□□ -2.25
CLDN18P56856 RNU6-181P-201ENST00000363225 107 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 Y_RNA.201-201ENST00000364052 96 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 SNORA25.9-201ENST00000365087 128 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 Y_RNA.399-201ENST00000383955 105 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 RNU6-606P-201ENST00000384721 111 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 SNRPEP10-201ENST00000420249 274 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN18P56856 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN18P56856 AC004386.2-201ENST00000441858 148 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 AC074290.1-201ENST00000448883 135 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 RNA5SP102-201ENST00000516865 106 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 RNU6-445P-201ENST00000516949 107 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN18P56856 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.99□□□□□ -2.25
CLDN18P56856 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 AC006001.4-201ENST00000622243 395 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 AL133216.2-202ENST00000634512 349 ntBASIC0.99□□□□□ -2.25
CLDN18P56856 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CLDN18P56856 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CLDN18P56856 AL390237.1-201ENST00000404226 1415 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN18P56856 snoU2-30.2-201ENST00000362805 70 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 RNY3P10-201ENST00000384764 102 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 MIR515-2-201ENST00000384883 83 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 MIR515-1-201ENST00000384884 83 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.98□□□□□ -2.25
CLDN18P56856 PIGFP2-201ENST00000421400 651 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 MTCO2P3-201ENST00000442543 421 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.98□□□□□ -2.25
CLDN18P56856 SNORD42A-201ENST00000459584 64 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.98□□□□□ -2.25
CLDN18P56856 SUMO2P16-201ENST00000519475 264 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN18P56856 AL137161.1-201ENST00000532231 390 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AL442163.3-201ENST00000554110 156 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 SUB1P2-201ENST00000556401 297 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.98□□□□□ -2.25
CLDN18P56856 MTCO3P23-201ENST00000561363 289 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 MIR3664-201ENST00000579074 99 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 Z99497.2-201ENST00000603634 310 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 AL050303.3-201ENST00000613704 284 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.98□□□□□ -2.25
CLDN18P56856 AC068647.2-201ENST00000637380 353 ntBASIC0.98□□□□□ -2.25
CLDN18P56856 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLDN18P56856 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CLDN18P56856 RNU6-968P-201ENST00000384076 107 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 RNU6-297P-201ENST00000384636 107 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 RNU6-417P-201ENST00000384712 107 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CLDN18P56856 RNA5SP494-201ENST00000410653 129 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.97□□□□□ -2.25
CLDN18P56856 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDN18P56856 SNRPGP9-201ENST00000456025 225 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.97□□□□□ -2.25
CLDN18P56856 MTND1P22-201ENST00000510572 951 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 RPL39P5-202ENST00000512505 151 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 RNU6-612P-201ENST00000516909 102 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 RNU6-323P-201ENST00000521915 107 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 CENPUP1-201ENST00000526649 1202 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 DEFB131C-201ENST00000528817 165 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.97□□□□□ -2.25
CLDN18P56856 AC026470.2-201ENST00000561492 181 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 MIR3908-201ENST00000579798 126 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 AP000907.4-201ENST00000604143 237 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 TCL6_2.1-201ENST00000615162 119 ntBASIC0.97□□□□□ -2.25
CLDN18P56856 Y_RNA.226-201ENST00000364337 114 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 RNU6-1235P-201ENST00000384559 107 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 RNU6-950P-201ENST00000384651 107 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 MIR549A-201ENST00000385268 96 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 SNORD73A-201ENST00000386062 65 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
CLDN18P56856 CETN4P-201ENST00000432407 469 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms