Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-438P-201ENST00000365561 103 ntBASIC1.57□□□□□ -2.16
LIM2P55344 RNU6-95P-201ENST00000384697 107 ntBASIC1.57□□□□□ -2.16
LIM2P55344 MIR521-1-201ENST00000384902 87 ntBASIC1.57□□□□□ -2.16
LIM2P55344 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
LIM2P55344 RNU6-1093P-201ENST00000391194 107 ntBASIC1.57□□□□□ -2.16
LIM2P55344 MIR300-201ENST00000401138 83 ntBASIC1.57□□□□□ -2.16
LIM2P55344 RNA5SP494-201ENST00000410653 129 ntBASIC1.57□□□□□ -2.16
LIM2P55344 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LIM2P55344 AC007395.1-201ENST00000451333 677 ntBASIC1.57□□□□□ -2.16
LIM2P55344 OR2AQ1P-201ENST00000451972 200 ntBASIC1.57□□□□□ -2.16
LIM2P55344 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.57□□□□□ -2.16
LIM2P55344 RNU2-34P-201ENST00000516534 121 ntBASIC1.57□□□□□ -2.16
LIM2P55344 RNU6-1098P-201ENST00000516772 96 ntBASIC1.57□□□□□ -2.16
LIM2P55344 AC090517.1-201ENST00000569307 266 ntBASIC1.57□□□□□ -2.16
LIM2P55344 MIR3169-201ENST00000578032 83 ntBASIC1.57□□□□□ -2.16
LIM2P55344 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
LIM2P55344 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.57□□□□□ -2.16
LIM2P55344 AC009033.1-201ENST00000624279 431 ntBASIC1.57□□□□□ -2.16
LIM2P55344 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
LIM2P55344 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
LIM2P55344 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
LIM2P55344 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
LIM2P55344 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.56□□□□□ -2.16
LIM2P55344 AL513185.2-201ENST00000425543 193 ntBASIC1.56□□□□□ -2.16
LIM2P55344 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
LIM2P55344 UBE2V1P8-201ENST00000437166 265 ntBASIC1.56□□□□□ -2.16
LIM2P55344 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
LIM2P55344 PCMTD1P1-201ENST00000455560 355 ntBASIC1.56□□□□□ -2.16
LIM2P55344 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
LIM2P55344 ATP5EP1-201ENST00000510257 156 ntBASIC1.56□□□□□ -2.16
LIM2P55344 MIR449C-201ENST00000516047 92 ntBASIC1.56□□□□□ -2.16
LIM2P55344 RNU6-1314P-201ENST00000517139 104 ntBASIC1.56□□□□□ -2.16
LIM2P55344 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
LIM2P55344 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
LIM2P55344 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.56□□□□□ -2.16
LIM2P55344 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.56□□□□□ -2.16
LIM2P55344 AC146944.4-201ENST00000602697 718 ntBASIC1.56□□□□□ -2.16
LIM2P55344 AC005296.1-201ENST00000616145 209 ntBASIC1.56□□□□□ -2.16
LIM2P55344 AC005562.2-201ENST00000618264 111 ntBASIC1.56□□□□□ -2.16
LIM2P55344 AC139792.2-201ENST00000624218 587 ntBASIC1.56□□□□□ -2.16
LIM2P55344 SCARNA4-201ENST00000629045 128 ntBASIC1.56□□□□□ -2.16
LIM2P55344 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.55□□□□□ -2.16
LIM2P55344 SNORD115-8-201ENST00000363856 82 ntBASIC1.55□□□□□ -2.16
LIM2P55344 Y_RNA.295-201ENST00000364918 102 ntBASIC1.55□□□□□ -2.16
LIM2P55344 SNORD115-38-201ENST00000365037 82 ntBASIC1.55□□□□□ -2.16
LIM2P55344 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.55□□□□□ -2.16
LIM2P55344 RNU6-1013P-201ENST00000384180 107 ntBASIC1.55□□□□□ -2.16
LIM2P55344 Y_RNA.453-201ENST00000384223 109 ntBASIC1.55□□□□□ -2.16
LIM2P55344 RNU6-1026P-201ENST00000384465 108 ntBASIC1.55□□□□□ -2.16
LIM2P55344 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LIM2P55344 MIR676-201ENST00000390702 67 ntBASIC1.55□□□□□ -2.16
LIM2P55344 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AL353572.1-201ENST00000442490 417 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AL357134.1-201ENST00000445848 426 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AC112492.4-201ENST00000456549 352 ntBASIC1.55□□□□□ -2.16
LIM2P55344 RNU7-187P-201ENST00000458985 68 ntBASIC1.55□□□□□ -2.16
LIM2P55344 RNU7-14P-201ENST00000459331 62 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.55□□□□□ -2.16
LIM2P55344 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.55□□□□□ -2.16
LIM2P55344 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
LIM2P55344 RNU6-864P-201ENST00000516256 108 ntBASIC1.55□□□□□ -2.16
LIM2P55344 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.55□□□□□ -2.16
LIM2P55344 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
LIM2P55344 MIR3672-201ENST00000584290 82 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AP003465.2-201ENST00000602571 373 ntBASIC1.55□□□□□ -2.16
LIM2P55344 AC025754.2-201ENST00000606491 432 ntBASIC1.55□□□□□ -2.16
LIM2P55344 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.55□□□□□ -2.16
LIM2P55344 TCL6_2.1-201ENST00000615162 119 ntBASIC1.55□□□□□ -2.16
LIM2P55344 MIR6715A-201ENST00000615929 79 ntBASIC1.55□□□□□ -2.16
LIM2P55344 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.55□□□□□ -2.16
LIM2P55344 SNORD115-32-201ENST00000364079 82 ntBASIC1.54□□□□□ -2.16
LIM2P55344 RNU6-596P-201ENST00000365395 98 ntBASIC1.54□□□□□ -2.16
LIM2P55344 SNORD116-11-201ENST00000383882 92 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MIR597-201ENST00000384968 97 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MIR764-201ENST00000390811 85 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AL356432.1-201ENST00000405809 419 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MIR1277-201ENST00000408536 78 ntBASIC1.54□□□□□ -2.16
LIM2P55344 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AC079354.2-201ENST00000453523 154 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MTND1P11-201ENST00000456661 876 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.54□□□□□ -2.16
LIM2P55344 AF186996.7-201ENST00000492781 209 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MTCYBP18-201ENST00000501056 747 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MTCO2P30-201ENST00000503662 364 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.54□□□□□ -2.16
LIM2P55344 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.54□□□□□ -2.16
LIM2P55344 ACA59.1-201ENST00000515966 143 ntBASIC1.54□□□□□ -2.16
LIM2P55344 RNU6-1198P-201ENST00000516904 67 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
LIM2P55344 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.54□□□□□ -2.16
LIM2P55344 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
LIM2P55344 SNRPGP20-201ENST00000604477 205 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.54□□□□□ -2.16
LIM2P55344 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.54□□□□□ -2.16
LIM2P55344 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
LIM2P55344 AC090617.10-201ENST00000624308 134 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MTND4P5-201ENST00000435821 1374 ntBASIC1.54□□□□□ -2.16
LIM2P55344 MTND5P9-201ENST00000503854 1755 ntBASIC1.54□□□□□ -2.16
LIM2P55344 BX322639.1-202ENST00000423987 2213 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms