Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR3976-201ENST00000606807 139 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS2P54868 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS2P54868 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HMGCS2P54868 AP000560.1-201ENST00000624150 1937 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 snoU2_19.1-201ENST00000362361 80 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 Y_RNA.166-201ENST00000363730 102 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 SNORD81.2-201ENST00000365153 76 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 RNY3P14-201ENST00000384309 102 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 AL591034.2-201ENST00000402839 359 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 MIR548K-201ENST00000408406 116 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.88□□□□□ -2.11
HMGCS2P54868 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGCS2P54868 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGCS2P54868 AC018889.1-201ENST00000605372 397 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 BX248123.2-201ENST00000606318 124 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 MIR8076-201ENST00000611401 83 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 SNORD98-201ENST00000636377 67 ntBASIC1.88□□□□□ -2.11
HMGCS2P54868 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGCS2P54868 SNORD50.1-201ENST00000362987 71 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 RNU6-1274P-201ENST00000384557 107 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 RNU6-306P-201ENST00000384617 107 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 MIR517A-201ENST00000385001 87 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMGCS2P54868 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGCS2P54868 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGCS2P54868 PCMTD1P1-201ENST00000455560 355 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 U8.21-201ENST00000459536 136 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AC022447.4-201ENST00000504053 364 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS2P54868 AC005741.1-201ENST00000511094 432 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGCS2P54868 AC115990.1-201ENST00000526957 301 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 MIR4790-201ENST00000577799 79 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AL022345.1-201ENST00000607292 135 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AL355073.2-201ENST00000612106 557 ntBASIC1.87□□□□□ -2.11
HMGCS2P54868 AC009541.1-201ENST00000438279 2662 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGCS2P54868 RNU1-23P-201ENST00000363361 144 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 SNORA72.1-201ENST00000363485 129 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 RNU6-944P-201ENST00000364023 107 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 RNU6-784P-201ENST00000384330 106 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 Y_RNA.504-201ENST00000384481 104 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 MIR521-1-201ENST00000384902 87 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 BTF3L4P2-201ENST00000392798 346 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC004965.1-201ENST00000413033 213 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AL590135.1-201ENST00000422215 156 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC019205.3-201ENST00000424573 156 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AC016700.2-201ENST00000446011 156 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AC079354.2-201ENST00000453523 154 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AC018868.1-201ENST00000491307 315 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC015911.1-201ENST00000495111 156 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC103851.1-201ENST00000506833 274 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 RNA5SP137-201ENST00000516833 135 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 MRPS36P4-201ENST00000534436 298 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS2P54868 AL034555.1-201ENST00000604816 211 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AL162373.1-201ENST00000620433 407 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGCS2P54868 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
HMGCS2P54868 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 AC092268.1-201ENST00000342691 405 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 Y_RNA.123-201ENST00000363338 102 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RNU6-142P-201ENST00000384019 107 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 SNORA46.1-201ENST00000391069 153 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 MIR548F5-201ENST00000408421 86 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RNA5SP201-201ENST00000410316 124 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RNU2-48P-201ENST00000410694 191 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 AC098614.3-201ENST00000438957 440 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS2P54868 AC016632.1-201ENST00000503994 196 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 Y_RNA.691-201ENST00000516611 103 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 SNORA48.11-201ENST00000517015 89 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RNU6-586P-201ENST00000517265 104 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS2P54868 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS2P54868 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS2P54868 AC015720.1-201ENST00000565251 277 ntBASIC1.85□□□□□ -2.11
HMGCS2P54868 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS2P54868 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms