Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.8□□□□□ -1.96
COPAP53621 OR2AQ1P-201ENST00000451972 200 ntBASIC2.8□□□□□ -1.96
COPAP53621 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
COPAP53621 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.8□□□□□ -1.96
COPAP53621 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.8□□□□□ -1.96
COPAP53621 RNU6-1045P-201ENST00000516321 107 ntBASIC2.8□□□□□ -1.96
COPAP53621 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.8□□□□□ -1.96
COPAP53621 MIR4658-201ENST00000584344 65 ntBASIC2.8□□□□□ -1.96
COPAP53621 VN1R91P-201ENST00000594377 169 ntBASIC2.8□□□□□ -1.96
COPAP53621 AL713866.2-201ENST00000603579 219 ntBASIC2.8□□□□□ -1.96
COPAP53621 AL138963.2-201ENST00000605137 226 ntBASIC2.8□□□□□ -1.96
COPAP53621 AL132822.1-201ENST00000617063 513 ntBASIC2.8□□□□□ -1.96
COPAP53621 AC087588.2-201ENST00000617667 426 ntBASIC2.8□□□□□ -1.96
COPAP53621 U2.1-201ENST00000618978 145 ntBASIC2.8□□□□□ -1.96
COPAP53621 MIR5739-201ENST00000619803 80 ntBASIC2.8□□□□□ -1.96
COPAP53621 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.8□□□□□ -1.96
COPAP53621 AC243829.7-201ENST00000633081 225 ntBASIC2.8□□□□□ -1.96
COPAP53621 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPAP53621 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
COPAP53621 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COPAP53621 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.8□□□□□ -1.96
COPAP53621 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.79□□□□□ -1.96
COPAP53621 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COPAP53621 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
COPAP53621 RNU6-874P-201ENST00000362390 105 ntBASIC2.79□□□□□ -1.96
COPAP53621 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
COPAP53621 Y_RNA.106-201ENST00000363189 100 ntBASIC2.79□□□□□ -1.96
COPAP53621 SNORA63C-201ENST00000364578 129 ntBASIC2.79□□□□□ -1.96
COPAP53621 Y_RNA.358-201ENST00000365491 99 ntBASIC2.79□□□□□ -1.96
COPAP53621 RNU6-738P-201ENST00000384531 106 ntBASIC2.79□□□□□ -1.96
COPAP53621 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
COPAP53621 Y_RNA.592-201ENST00000410274 109 ntBASIC2.79□□□□□ -1.96
COPAP53621 MTCO3P19-201ENST00000415864 321 ntBASIC2.79□□□□□ -1.96
COPAP53621 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.79□□□□□ -1.96
COPAP53621 AL139109.1-201ENST00000455491 297 ntBASIC2.79□□□□□ -1.96
COPAP53621 ANXA2P1-201ENST00000505539 926 ntBASIC2.79□□□□□ -1.96
COPAP53621 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.79□□□□□ -1.96
COPAP53621 RNU6-1198P-201ENST00000516904 67 ntBASIC2.79□□□□□ -1.96
COPAP53621 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.79□□□□□ -1.96
COPAP53621 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.79□□□□□ -1.96
COPAP53621 MIR4680-201ENST00000580906 66 ntBASIC2.79□□□□□ -1.96
COPAP53621 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
COPAP53621 SNORD58B-201ENST00000607313 66 ntBASIC2.79□□□□□ -1.96
COPAP53621 MIR203B-201ENST00000636080 86 ntBASIC2.79□□□□□ -1.96
COPAP53621 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
COPAP53621 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
COPAP53621 AC091812.1-201ENST00000432235 1948 ntBASIC2.78□□□□□ -1.96
COPAP53621 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COPAP53621 AC092593.1-201ENST00000515413 1815 ntBASIC2.78□□□□□ -1.96
COPAP53621 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
COPAP53621 Y_RNA.145-201ENST00000363527 102 ntBASIC2.78□□□□□ -1.96
COPAP53621 Y_RNA.319-201ENST00000365138 92 ntBASIC2.78□□□□□ -1.96
COPAP53621 Y_RNA.485-201ENST00000384395 102 ntBASIC2.78□□□□□ -1.96
COPAP53621 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
COPAP53621 RPS26P42-201ENST00000413485 326 ntBASIC2.78□□□□□ -1.96
COPAP53621 USP9YP16-201ENST00000430287 407 ntBASIC2.78□□□□□ -1.96
COPAP53621 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
COPAP53621 USP9YP23-201ENST00000455085 407 ntBASIC2.78□□□□□ -1.96
COPAP53621 SNORA40.14-201ENST00000516543 86 ntBASIC2.78□□□□□ -1.96
COPAP53621 Y_RNA.721-201ENST00000517207 102 ntBASIC2.78□□□□□ -1.96
COPAP53621 RNU6-586P-201ENST00000517265 104 ntBASIC2.78□□□□□ -1.96
COPAP53621 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.78□□□□□ -1.96
COPAP53621 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.78□□□□□ -1.96
COPAP53621 AC090617.3-201ENST00000573670 475 ntBASIC2.78□□□□□ -1.96
COPAP53621 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.78□□□□□ -1.96
COPAP53621 AC008121.3-201ENST00000618726 433 ntBASIC2.78□□□□□ -1.96
COPAP53621 AL162373.1-201ENST00000620433 407 ntBASIC2.78□□□□□ -1.96
COPAP53621 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.78□□□□□ -1.96
COPAP53621 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.78□□□□□ -1.96
COPAP53621 MTND5P16-201ENST00000460269 1703 ntBASIC2.78□□□□□ -1.96
COPAP53621 ZNF72P-201ENST00000425869 1908 ntBASIC2.78□□□□□ -1.97
COPAP53621 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
COPAP53621 U3.9-201ENST00000363823 204 ntBASIC2.77□□□□□ -1.97
COPAP53621 Y_RNA.389-201ENST00000383924 113 ntBASIC2.77□□□□□ -1.97
COPAP53621 RNU1-52P-201ENST00000384190 164 ntBASIC2.77□□□□□ -1.97
COPAP53621 RNU6-378P-201ENST00000384324 107 ntBASIC2.77□□□□□ -1.97
COPAP53621 Y_RNA.526-201ENST00000384572 110 ntBASIC2.77□□□□□ -1.97
COPAP53621 SNORA46.1-201ENST00000391069 153 ntBASIC2.77□□□□□ -1.97
COPAP53621 RNU6-101P-201ENST00000410323 104 ntBASIC2.77□□□□□ -1.97
COPAP53621 CHEK2P4-201ENST00000450340 246 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC011753.1-201ENST00000451001 220 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC112492.4-201ENST00000456549 352 ntBASIC2.77□□□□□ -1.97
COPAP53621 CYP2C59P-201ENST00000457790 269 ntBASIC2.77□□□□□ -1.97
COPAP53621 RNU6-911P-201ENST00000516523 104 ntBASIC2.77□□□□□ -1.97
COPAP53621 MIR2355-201ENST00000517199 87 ntBASIC2.77□□□□□ -1.97
COPAP53621 HSPE1P18-201ENST00000517602 280 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.77□□□□□ -1.97
COPAP53621 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.77□□□□□ -1.97
COPAP53621 AC008737.2-201ENST00000599446 118 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC016727.2-201ENST00000603988 621 ntBASIC2.77□□□□□ -1.97
COPAP53621 PCGEM1.1-201ENST00000613431 131 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC005520.5-201ENST00000613926 164 ntBASIC2.77□□□□□ -1.97
COPAP53621 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.77□□□□□ -1.97
COPAP53621 AC138305.3-201ENST00000624988 240 ntBASIC2.77□□□□□ -1.97
COPAP53621 IGHVIII-44-202ENST00000636235 289 ntBASIC2.77□□□□□ -1.97
COPAP53621 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
COPAP53621 RNU6-137P-201ENST00000363680 108 ntBASIC2.76□□□□□ -1.97
COPAP53621 SNORD14.1-201ENST00000365609 90 ntBASIC2.76□□□□□ -1.97
COPAP53621 U8.10-201ENST00000384260 133 ntBASIC2.76□□□□□ -1.97
COPAP53621 RNU6-1274P-201ENST00000384557 107 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms