Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.78□□□□□ -1.96
COPB1P53618 RNU6-238P-201ENST00000363313 106 ntBASIC2.78□□□□□ -1.96
COPB1P53618 Y_RNA.152-201ENST00000363578 100 ntBASIC2.78□□□□□ -1.96
COPB1P53618 RNU6-137P-201ENST00000363680 108 ntBASIC2.78□□□□□ -1.96
COPB1P53618 Y_RNA.512-201ENST00000384518 102 ntBASIC2.78□□□□□ -1.96
COPB1P53618 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AL590135.1-201ENST00000422215 156 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC012306.1-201ENST00000423267 114 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC019205.3-201ENST00000424573 156 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC063976.3-201ENST00000426849 329 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
COPB1P53618 RPEP5-201ENST00000441137 268 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC016700.2-201ENST00000446011 156 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AL441985.1-201ENST00000457727 251 ntBASIC2.78□□□□□ -1.96
COPB1P53618 snoU13.6-201ENST00000458785 104 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.78□□□□□ -1.96
COPB1P53618 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.78□□□□□ -1.96
COPB1P53618 SNORA31.6-201ENST00000516241 130 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC091144.1-201ENST00000519573 138 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC079598.5-201ENST00000547460 117 ntBASIC2.78□□□□□ -1.96
COPB1P53618 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.78□□□□□ -1.96
COPB1P53618 AC105137.2-201ENST00000569073 466 ntBASIC2.78□□□□□ -1.96
COPB1P53618 MYL12BP1-201ENST00000569826 507 ntBASIC2.78□□□□□ -1.96
COPB1P53618 uc_338.14-201ENST00000613162 166 ntBASIC2.78□□□□□ -1.96
COPB1P53618 U4.1-201ENST00000620349 87 ntBASIC2.78□□□□□ -1.96
COPB1P53618 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
COPB1P53618 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
COPB1P53618 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COPB1P53618 RNU6-1301P-201ENST00000362724 104 ntBASIC2.77□□□□□ -1.97
COPB1P53618 RNU1-76P-201ENST00000362903 159 ntBASIC2.77□□□□□ -1.97
COPB1P53618 SNORD114-19-201ENST00000363072 75 ntBASIC2.77□□□□□ -1.97
COPB1P53618 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
COPB1P53618 Y_RNA.458-201ENST00000384240 102 ntBASIC2.77□□□□□ -1.97
COPB1P53618 RNU6-611P-201ENST00000384276 104 ntBASIC2.77□□□□□ -1.97
COPB1P53618 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
COPB1P53618 AL358075.3-201ENST00000426289 226 ntBASIC2.77□□□□□ -1.97
COPB1P53618 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.77□□□□□ -1.97
COPB1P53618 OSTCP8-201ENST00000445117 448 ntBASIC2.77□□□□□ -1.97
COPB1P53618 UBBP3-201ENST00000445497 241 ntBASIC2.77□□□□□ -1.97
COPB1P53618 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
COPB1P53618 HMGB1P35-201ENST00000503360 598 ntBASIC2.77□□□□□ -1.97
COPB1P53618 SNORA25.11-201ENST00000515935 105 ntBASIC2.77□□□□□ -1.97
COPB1P53618 RNU6-897P-201ENST00000517135 105 ntBASIC2.77□□□□□ -1.97
COPB1P53618 RNU6-58P-201ENST00000517143 103 ntBASIC2.77□□□□□ -1.97
COPB1P53618 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.77□□□□□ -1.97
COPB1P53618 AC004817.2-201ENST00000561794 651 ntBASIC2.77□□□□□ -1.97
COPB1P53618 AL121655.1-201ENST00000605811 308 ntBASIC2.77□□□□□ -1.97
COPB1P53618 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.77□□□□□ -1.97
COPB1P53618 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
COPB1P53618 SNORD98-201ENST00000636377 67 ntBASIC2.77□□□□□ -1.97
COPB1P53618 U6.92-201ENST00000636464 89 ntBASIC2.77□□□□□ -1.97
COPB1P53618 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COPB1P53618 AL109809.4-201ENST00000603520 2185 ntBASIC2.77□□□□□ -1.97
COPB1P53618 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
COPB1P53618 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COPB1P53618 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.76□□□□□ -1.97
COPB1P53618 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COPB1P53618 Y_RNA.26-201ENST00000362539 101 ntBASIC2.76□□□□□ -1.97
COPB1P53618 Y_RNA.319-201ENST00000365138 92 ntBASIC2.76□□□□□ -1.97
COPB1P53618 RNU6-318P-201ENST00000384283 103 ntBASIC2.76□□□□□ -1.97
COPB1P53618 Y_RNA.471-201ENST00000384312 102 ntBASIC2.76□□□□□ -1.97
COPB1P53618 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
COPB1P53618 MIR10B-201ENST00000385011 110 ntBASIC2.76□□□□□ -1.97
COPB1P53618 MIR767-201ENST00000390228 109 ntBASIC2.76□□□□□ -1.97
COPB1P53618 RNU6-159P-201ENST00000391080 106 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.76□□□□□ -1.97
COPB1P53618 AC138623.1-201ENST00000418060 216 ntBASIC2.76□□□□□ -1.97
COPB1P53618 USP9YP16-201ENST00000430287 407 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 DYNLT3P2-201ENST00000442517 295 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 AC096638.1-201ENST00000444678 216 ntBASIC2.76□□□□□ -1.97
COPB1P53618 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.76□□□□□ -1.97
COPB1P53618 USP9YP23-201ENST00000455085 407 ntBASIC2.76□□□□□ -1.97
COPB1P53618 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.76□□□□□ -1.97
COPB1P53618 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
COPB1P53618 RNU6-1114P-201ENST00000516022 107 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 AL161670.1-201ENST00000554348 137 ntBASIC2.76□□□□□ -1.97
COPB1P53618 MIR3136-201ENST00000583498 78 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AC104984.5-201ENST00000586878 94 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AC005520.5-201ENST00000613926 164 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AC010205.1-201ENST00000616668 449 ntBASIC2.76□□□□□ -1.97
COPB1P53618 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.76□□□□□ -1.97
COPB1P53618 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COPB1P53618 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COPB1P53618 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RNU6-770P-201ENST00000363929 105 ntBASIC2.75□□□□□ -1.97
COPB1P53618 Y_RNA.222-201ENST00000364264 102 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RNU6-281P-201ENST00000384212 103 ntBASIC2.75□□□□□ -1.97
COPB1P53618 MIR186-201ENST00000384988 86 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RNA5SP354-201ENST00000391247 136 ntBASIC2.75□□□□□ -1.97
COPB1P53618 FO393413.1-201ENST00000402892 195 ntBASIC2.75□□□□□ -1.97
COPB1P53618 MIR1302-3-201ENST00000408128 138 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RNA5SP508-201ENST00000411327 119 ntBASIC2.75□□□□□ -1.97
COPB1P53618 SDAD1P3-201ENST00000427380 333 ntBASIC2.75□□□□□ -1.97
COPB1P53618 RPS15AP7-201ENST00000439294 405 ntBASIC2.75□□□□□ -1.97
COPB1P53618 AL731563.1-201ENST00000442202 214 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms