Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MTND4P19-201ENST00000446659 478 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 AC090096.1-201ENST00000489168 390 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.91□□□□□ -2.1
HCFC1P51610 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.91□□□□□ -2.1
HCFC1P51610 AC067747.1-201ENST00000608026 250 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 PART1_1.1-201ENST00000611761 217 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 AC245884.12-201ENST00000615364 59 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 Z82209.1-201ENST00000422141 2135 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HCFC1P51610 AP000560.1-201ENST00000624150 1937 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 MTND4P23-201ENST00000447723 1363 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.91□□□□□ -2.1
HCFC1P51610 RNU6-1159P-201ENST00000362933 107 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 RNU1-115P-201ENST00000365329 160 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 RNU6-142P-201ENST00000384019 107 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 SNORA80E-201ENST00000384744 137 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 Y_RNA.645-201ENST00000391229 102 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HCFC1P51610 RN7SKP61-201ENST00000410642 295 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.91□□□□□ -2.1
HCFC1P51610 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.91□□□□□ -2.1
HCFC1P51610 AC022447.4-201ENST00000504053 364 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.91□□□□□ -2.1
HCFC1P51610 SNORA25.11-201ENST00000515935 105 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 SCARNA15.1-201ENST00000516384 125 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 RNU2-44P-201ENST00000516795 194 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.91□□□□□ -2.1
HCFC1P51610 AC027288.2-201ENST00000553028 243 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
HCFC1P51610 MIR3616-201ENST00000584070 92 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 TCL6_2.1-201ENST00000615162 119 ntBASIC1.91□□□□□ -2.1
HCFC1P51610 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.91□□□□□ -2.1
HCFC1P51610 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
HCFC1P51610 RNU6-1115P-201ENST00000362490 106 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 Y_RNA.27-201ENST00000362540 103 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-595P-201ENST00000363944 107 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 SNORD21-201ENST00000383953 95 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-17P-201ENST00000384245 107 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-18P-201ENST00000384527 107 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-306P-201ENST00000384617 107 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MTCO2P12-201ENST00000427426 682 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MTCYBP6-201ENST00000441810 138 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 Y_RNA.661-201ENST00000516003 99 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-548P-201ENST00000517083 115 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 RNU6-264P-201ENST00000517134 104 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC091144.1-201ENST00000519573 138 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC090617.3-201ENST00000573670 475 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR5571-201ENST00000577998 113 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR1244-1-201ENST00000612829 85 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC040896.1-201ENST00000613819 479 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR1244-3-201ENST00000635744 85 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR1244-2-201ENST00000636449 85 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR1244-4-202ENST00000636813 85 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HCFC1P51610 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HCFC1P51610 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HCFC1P51610 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
HCFC1P51610 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HCFC1P51610 RNA5SP99-201ENST00000364020 114 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 SNORA75.6-201ENST00000391318 127 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 SNORA11.4-201ENST00000408823 129 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC078809.1-201ENST00000427601 140 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 Z82188.1-201ENST00000436709 154 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 UBBP3-201ENST00000445497 241 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIR2355-201ENST00000517199 87 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.9□□□□□ -2.11
HCFC1P51610 UBL5P4-201ENST00000562584 236 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 CYP4A27P-201ENST00000567218 190 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.9□□□□□ -2.11
HCFC1P51610 SNRPGP17-201ENST00000603780 214 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC005520.5-201ENST00000613926 164 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 AC091925.1-201ENST00000623204 462 ntBASIC1.9□□□□□ -2.11
HCFC1P51610 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
HCFC1P51610 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HCFC1P51610 RNU6-490P-201ENST00000362985 107 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 RNA5SP125-201ENST00000364843 120 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 Y_RNA.485-201ENST00000384395 102 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 RNA5SP213-201ENST00000391031 106 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.89□□□□□ -2.11
HCFC1P51610 SUMO1P4-201ENST00000429430 302 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 RPS15AP28-201ENST00000435088 386 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 AL353752.1-201ENST00000454946 260 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 RPL23AP75-201ENST00000491601 451 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.89□□□□□ -2.11
HCFC1P51610 SCARNA17.1-201ENST00000516211 143 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 SCARNA17.2-201ENST00000516334 143 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 GNAI2P1-201ENST00000541815 315 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 AL670379.2-201ENST00000604983 252 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 SCARNA17.4-201ENST00000614296 143 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
HCFC1P51610 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
HCFC1P51610 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
HCFC1P51610 MRPS18CP6-201ENST00000423587 223 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 AC009414.1-201ENST00000427200 443 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
HCFC1P51610 SNRPGP7-201ENST00000469016 106 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms