Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-390P-201ENST00000516259 103 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RNU6-158P-201ENST00000517104 100 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.49□□□□□ -2.49
HTTP42858 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.49□□□□□ -2.49
HTTP42858 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.49□□□□□ -2.49
HTTP42858 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.49□□□□□ -2.49
HTTP42858 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.49□□□□□ -2.49
HTTP42858 SMIM11P1-201ENST00000369586 178 ntBASIC-0.49□□□□□ -2.49
HTTP42858 MIR514A1-201ENST00000385133 98 ntBASIC-0.49□□□□□ -2.49
HTTP42858 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.49□□□□□ -2.49
HTTP42858 AC006366.1-201ENST00000422002 759 ntBASIC-0.49□□□□□ -2.49
HTTP42858 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.49□□□□□ -2.49
HTTP42858 MTCO3P29-201ENST00000432119 779 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.49□□□□□ -2.49
HTTP42858 AL163973.1-201ENST00000484753 577 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.49□□□□□ -2.49
HTTP42858 MIR4782-201ENST00000577987 79 ntBASIC-0.49□□□□□ -2.49
HTTP42858 MIR4742-201ENST00000581069 85 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.49□□□□□ -2.49
HTTP42858 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.49□□□□□ -2.49
HTTP42858 SNORA12-201ENST00000391162 147 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AL079342.2-201ENST00000403367 482 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AC133104.1-201ENST00000429100 218 ntBASIC-0.5□□□□□ -2.49
HTTP42858 snoU13.14-201ENST00000459372 104 ntBASIC-0.5□□□□□ -2.49
HTTP42858 SNORA70.12-201ENST00000516084 153 ntBASIC-0.5□□□□□ -2.49
HTTP42858 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.5□□□□□ -2.49
HTTP42858 AC021231.3-201ENST00000558497 370 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.5□□□□□ -2.49
HTTP42858 MTND3P19-201ENST00000603825 345 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AL670379.3-201ENST00000605040 251 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AP002360.4-201ENST00000606980 481 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AC017104.5-201ENST00000637647 639 ntBASIC-0.5□□□□□ -2.49
HTTP42858 MTND5P31-201ENST00000419366 1374 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.5□□□□□ -2.49
HTTP42858 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.5□□□□□ -2.49
HTTP42858 RNU6-333P-201ENST00000459117 107 ntBASIC-0.5□□□□□ -2.49
HTTP42858 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
HTTP42858 RNU1-86P-201ENST00000516108 154 ntBASIC-0.5□□□□□ -2.49
HTTP42858 RNU1-107P-201ENST00000516617 154 ntBASIC-0.5□□□□□ -2.49
HTTP42858 OR8K2P-201ENST00000524645 927 ntBASIC-0.5□□□□□ -2.49
HTTP42858 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.5□□□□□ -2.49
HTTP42858 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.5□□□□□ -2.49
HTTP42858 AC131159.1-201ENST00000621854 213 ntBASIC-0.5□□□□□ -2.49
HTTP42858 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.51□□□□□ -2.49
HTTP42858 MIR660-201ENST00000385235 97 ntBASIC-0.51□□□□□ -2.49
HTTP42858 CBX3P9-201ENST00000402326 552 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC109327.2-201ENST00000448339 378 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
HTTP42858 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
HTTP42858 MTCO3P28-201ENST00000513351 515 ntBASIC-0.51□□□□□ -2.49
HTTP42858 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.51□□□□□ -2.49
HTTP42858 MIR4771-2-201ENST00000577758 74 ntBASIC-0.51□□□□□ -2.49
HTTP42858 MIR4771-1-201ENST00000582617 74 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AP001429.1-201ENST00000602568 530 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AL929325.1-201ENST00000603096 117 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.51□□□□□ -2.49
HTTP42858 MIR4275-201ENST00000636486 87 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC106754.1-201ENST00000562632 1513 ntBASIC-0.51□□□□□ -2.49
HTTP42858 RNU6-858P-201ENST00000362436 107 ntBASIC-0.51□□□□□ -2.49
HTTP42858 PCNPP3-201ENST00000393579 471 ntBASIC-0.51□□□□□ -2.49
HTTP42858 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.51□□□□□ -2.49
HTTP42858 AL512637.2-201ENST00000431287 1256 ntBASIC-0.51□□□□□ -2.49
HTTP42858 USP9YP29-201ENST00000445112 563 ntBASIC-0.51□□□□□ -2.49
HTTP42858 RNU6-488P-201ENST00000515918 99 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.51□□□□□ -2.49
HTTP42858 AC109446.1-201ENST00000566172 220 ntBASIC-0.51□□□□□ -2.49
HTTP42858 MIR3136-201ENST00000583498 78 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC245008.1-201ENST00000608123 476 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC068792.1-201ENST00000621354 417 ntBASIC-0.51□□□□□ -2.49
HTTP42858 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.51□□□□□ -2.49
HTTP42858 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC073910.1-201ENST00000445047 438 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC007327.1-201ENST00000447461 264 ntBASIC-0.51□□□□□ -2.49
HTTP42858 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.51□□□□□ -2.49
HTTP42858 RNU1-117P-201ENST00000517041 158 ntBASIC-0.51□□□□□ -2.49
HTTP42858 LRRC34P1-201ENST00000542742 915 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AC068790.2-201ENST00000602601 557 ntBASIC-0.51□□□□□ -2.49
HTTP42858 AL034555.1-201ENST00000604816 211 ntBASIC-0.51□□□□□ -2.49
HTTP42858 RNA5SP192-201ENST00000364404 120 ntBASIC-0.52□□□□□ -2.49
HTTP42858 RNU6-796P-201ENST00000391086 107 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC092809.3-201ENST00000415453 231 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC009237.7-201ENST00000447357 229 ntBASIC-0.52□□□□□ -2.49
HTTP42858 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.52□□□□□ -2.49
HTTP42858 AC005042.3-201ENST00000453230 174 ntBASIC-0.52□□□□□ -2.49
HTTP42858 MRPL42P4-201ENST00000453267 443 ntBASIC-0.52□□□□□ -2.49
HTTP42858 RPL39P38-201ENST00000467018 153 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC104629.2-201ENST00000468627 598 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC013828.1-201ENST00000481845 158 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC027419.1-201ENST00000522976 328 ntBASIC-0.52□□□□□ -2.49
HTTP42858 SNORD114-14-201ENST00000362723 75 ntBASIC-0.52□□□□□ -2.49
HTTP42858 RNU6-444P-201ENST00000383988 108 ntBASIC-0.52□□□□□ -2.49
HTTP42858 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
HTTP42858 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.52□□□□□ -2.49
HTTP42858 RNA5SP482-201ENST00000391269 118 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.52□□□□□ -2.49
HTTP42858 MTCO2P7-201ENST00000446518 666 ntBASIC-0.52□□□□□ -2.49
HTTP42858 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.52□□□□□ -2.49
HTTP42858 AC010424.1-201ENST00000506336 297 ntBASIC-0.52□□□□□ -2.49
HTTP42858 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms