Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXD13P35453 RNU6-358P-201ENST00000516564 75 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXD13P35453 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXD13P35453 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.15□□□□□ -2.07
HOXD13P35453 MIR5006-201ENST00000583027 110 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 MIR4753-201ENST00000585119 83 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AC011712.1-201ENST00000588959 234 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AC060780.3-201ENST00000589464 80 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AC016727.2-201ENST00000603988 621 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXD13P35453 AL773524.1-201ENST00000614065 229 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AL590240.4-201ENST00000616908 390 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AC092881.1-201ENST00000638218 2733 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXD13P35453 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXD13P35453 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXD13P35453 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXD13P35453 CBX3P1-201ENST00000325243 554 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 SNORA70B-201ENST00000384210 135 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AL358453.1-201ENST00000422522 250 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXD13P35453 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXD13P35453 AC074290.1-201ENST00000448883 135 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 MTND1P17-201ENST00000448961 204 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AC079354.2-201ENST00000453523 154 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AC114982.1-201ENST00000469402 321 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 MIR4790-201ENST00000577799 79 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 BX322639.1-202ENST00000423987 2213 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 KPNA2P1-201ENST00000458289 1591 ntBASIC2.14□□□□□ -2.07
HOXD13P35453 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXD13P35453 Y_RNA.301-201ENST00000364990 103 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 RNU6-596P-201ENST00000365395 98 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 RNU6-306P-201ENST00000384617 107 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 RNU6-1148P-201ENST00000410992 104 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HOXD13P35453 AC244636.1-201ENST00000421152 228 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 AC139712.2-201ENST00000424302 339 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXD13P35453 MTATP6P13-201ENST00000438531 667 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXD13P35453 PPP1R2P5-201ENST00000457256 603 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 RNU6-329P-201ENST00000459618 107 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 RNU6-1088P-201ENST00000516850 104 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXD13P35453 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXD13P35453 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
HOXD13P35453 AC013412.1-201ENST00000610687 192 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
HOXD13P35453 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXD13P35453 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HOXD13P35453 SNORD114-6-201ENST00000364393 72 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 MIR153-2-201ENST00000385225 87 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 RNU2-20P-201ENST00000410425 191 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXD13P35453 AC009237.7-201ENST00000447357 229 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 snoU13.30-201ENST00000458951 104 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 AC018710.1-201ENST00000506509 158 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 RNU2-34P-201ENST00000516534 121 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXD13P35453 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 MIR6128-201ENST00000615528 109 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
HOXD13P35453 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXD13P35453 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
HOXD13P35453 RNU5F-3P-201ENST00000363767 117 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HOXD13P35453 SNORA8-201ENST00000384574 139 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MIR32-201ENST00000384965 70 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MIR1283-1-201ENST00000408494 87 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 RNA5SP501-201ENST00000410990 112 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MTND3P8-201ENST00000412909 339 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MTCO3P46-201ENST00000425787 232 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXD13P35453 SUMO2P18-201ENST00000518873 252 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MIR3169-201ENST00000578032 83 ntBASIC2.11□□□□□ -2.07
HOXD13P35453 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXD13P35453 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXD13P35453 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HOXD13P35453 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HOXD13P35453 RNU6-545P-201ENST00000362681 104 ntBASIC2.1□□□□□ -2.07
HOXD13P35453 RNU6-137P-201ENST00000363680 108 ntBASIC2.1□□□□□ -2.07
HOXD13P35453 SNORD115-8-201ENST00000363856 82 ntBASIC2.1□□□□□ -2.07
HOXD13P35453 SNORD115-38-201ENST00000365037 82 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms