Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.79□□□□□ -2.28
RPA3P35244 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.79□□□□□ -2.28
RPA3P35244 RPL31P35-201ENST00000431058 377 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.79□□□□□ -2.28
RPA3P35244 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.79□□□□□ -2.28
RPA3P35244 RNU2-34P-201ENST00000516534 121 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AP003072.2-201ENST00000527756 676 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.79□□□□□ -2.28
RPA3P35244 AC109446.2-201ENST00000567872 497 ntBASIC0.79□□□□□ -2.28
RPA3P35244 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.79□□□□□ -2.28
RPA3P35244 MIR98-201ENST00000606724 119 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AC104458.1-201ENST00000608243 463 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AC004223.4-201ENST00000612426 332 ntBASIC0.79□□□□□ -2.28
RPA3P35244 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.79□□□□□ -2.28
RPA3P35244 Y_RNA.191-201ENST00000363972 113 ntBASIC0.78□□□□□ -2.28
RPA3P35244 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
RPA3P35244 RNU6-108P-201ENST00000365558 107 ntBASIC0.78□□□□□ -2.28
RPA3P35244 RNU6-417P-201ENST00000384712 107 ntBASIC0.78□□□□□ -2.28
RPA3P35244 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
RPA3P35244 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
RPA3P35244 AC010154.1-201ENST00000425857 269 ntBASIC0.78□□□□□ -2.28
RPA3P35244 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.78□□□□□ -2.28
RPA3P35244 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.78□□□□□ -2.28
RPA3P35244 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.78□□□□□ -2.28
RPA3P35244 SCARNA18-201ENST00000459004 134 ntBASIC0.78□□□□□ -2.28
RPA3P35244 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
RPA3P35244 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
RPA3P35244 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
RPA3P35244 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.78□□□□□ -2.28
RPA3P35244 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
RPA3P35244 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.78□□□□□ -2.28
RPA3P35244 AC021506.2-201ENST00000612354 169 ntBASIC0.78□□□□□ -2.28
RPA3P35244 MTND4P4-201ENST00000439033 1366 ntBASIC0.78□□□□□ -2.28
RPA3P35244 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
RPA3P35244 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
RPA3P35244 MIR515-2-201ENST00000384883 83 ntBASIC0.77□□□□□ -2.29
RPA3P35244 MIR515-1-201ENST00000384884 83 ntBASIC0.77□□□□□ -2.29
RPA3P35244 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.77□□□□□ -2.29
RPA3P35244 MTND3P17-201ENST00000416968 344 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC009961.2-201ENST00000435771 251 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.77□□□□□ -2.29
RPA3P35244 MTND2P39-201ENST00000457230 764 ntBASIC0.77□□□□□ -2.29
RPA3P35244 RNU6-948P-201ENST00000516374 107 ntBASIC0.77□□□□□ -2.29
RPA3P35244 SCARNA16.2-201ENST00000516520 172 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.77□□□□□ -2.29
RPA3P35244 AC136932.1-201ENST00000574771 208 ntBASIC0.77□□□□□ -2.29
RPA3P35244 MIR3682-201ENST00000581338 84 ntBASIC0.77□□□□□ -2.29
RPA3P35244 FAM106DP-201ENST00000586416 501 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC016727.2-201ENST00000603988 621 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC108706.1-201ENST00000611053 297 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC005562.2-201ENST00000618264 111 ntBASIC0.77□□□□□ -2.29
RPA3P35244 AC006001.4-201ENST00000622243 395 ntBASIC0.77□□□□□ -2.29
RPA3P35244 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
RPA3P35244 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
RPA3P35244 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-1097P-201ENST00000363586 107 ntBASIC0.76□□□□□ -2.29
RPA3P35244 Y_RNA.287-201ENST00000364853 94 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-975P-201ENST00000384296 105 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-1235P-201ENST00000384559 107 ntBASIC0.76□□□□□ -2.29
RPA3P35244 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNA5SP467-201ENST00000391274 118 ntBASIC0.76□□□□□ -2.29
RPA3P35244 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
RPA3P35244 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.76□□□□□ -2.29
RPA3P35244 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.76□□□□□ -2.29
RPA3P35244 AL606517.2-201ENST00000442855 241 ntBASIC0.76□□□□□ -2.29
RPA3P35244 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-498P-201ENST00000459468 107 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RPL39P38-201ENST00000467018 153 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RPL39P5-202ENST00000512505 151 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-1069P-201ENST00000516612 133 ntBASIC0.76□□□□□ -2.29
RPA3P35244 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.76□□□□□ -2.29
RPA3P35244 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.76□□□□□ -2.29
RPA3P35244 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.76□□□□□ -2.29
RPA3P35244 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.76□□□□□ -2.29
RPA3P35244 MIR5006-201ENST00000583027 110 ntBASIC0.76□□□□□ -2.29
RPA3P35244 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.76□□□□□ -2.29
RPA3P35244 Z99497.2-201ENST00000603634 310 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNU6-85P-201ENST00000605989 107 ntBASIC0.76□□□□□ -2.29
RPA3P35244 AC006566.1-201ENST00000608943 513 ntBASIC0.76□□□□□ -2.29
RPA3P35244 AL021879.1-201ENST00000611756 288 ntBASIC0.76□□□□□ -2.29
RPA3P35244 AL603839.4-201ENST00000624658 1005 ntBASIC0.76□□□□□ -2.29
RPA3P35244 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.76□□□□□ -2.29
RPA3P35244 AC009541.1-201ENST00000438279 2662 ntBASIC0.76□□□□□ -2.29
RPA3P35244 RNU4-28P-201ENST00000364739 141 ntBASIC0.75□□□□□ -2.29
RPA3P35244 RNU4-48P-201ENST00000365559 182 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MIR499A-201ENST00000384903 122 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MIR549A-201ENST00000385268 96 ntBASIC0.75□□□□□ -2.29
RPA3P35244 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MTCO2P34-201ENST00000421994 607 ntBASIC0.75□□□□□ -2.29
RPA3P35244 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.75□□□□□ -2.29
RPA3P35244 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.75□□□□□ -2.29
RPA3P35244 AC004386.2-201ENST00000441858 148 ntBASIC0.75□□□□□ -2.29
RPA3P35244 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.75□□□□□ -2.29
RPA3P35244 AC079140.5-201ENST00000507882 310 ntBASIC0.75□□□□□ -2.29
RPA3P35244 AC005178.1-201ENST00000508392 440 ntBASIC0.75□□□□□ -2.29
RPA3P35244 RNU6-323P-201ENST00000521915 107 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MTCO3P23-201ENST00000561363 289 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MIR4661-201ENST00000582720 75 ntBASIC0.75□□□□□ -2.29
RPA3P35244 MIR4452-201ENST00000583004 71 ntBASIC0.75□□□□□ -2.29
RPA3P35244 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms