Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL031601.2-202ENST00000622650 282 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXC13P31276 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HOXC13P31276 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
HOXC13P31276 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HOXC13P31276 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
HOXC13P31276 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 Y_RNA.212-201ENST00000364177 102 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 Y_RNA.257-201ENST00000364596 102 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 RNU5E-7P-201ENST00000365290 117 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HOXC13P31276 Y_RNA.455-201ENST00000384230 98 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 Y_RNA.463-201ENST00000384271 102 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 RNU6-1026P-201ENST00000384465 108 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 RNU4-70P-201ENST00000384579 139 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 MIR17-201ENST00000385012 84 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXC13P31276 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXC13P31276 MTND1P17-201ENST00000448961 204 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 RPS27P21-201ENST00000486977 252 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AC097473.1-201ENST00000508142 408 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AC026436.1-201ENST00000510537 270 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AC087854.1-201ENST00000519706 414 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXC13P31276 LRRC37A5P-203ENST00000580181 585 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AL356575.1-201ENST00000603008 283 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 MIR6128-201ENST00000615528 109 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 U2.1-201ENST00000618978 145 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 AC078938.1-201ENST00000620993 318 ntBASIC2.45□□□□□ -2.02
HOXC13P31276 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC121333.1-201ENST00000567488 2709 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC13P31276 SNORD116-11-201ENST00000383882 92 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 RNU6-622P-201ENST00000384272 103 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 RNU6-393P-201ENST00000384475 107 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 RN7SKP192-201ENST00000411291 327 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 POLHP1-201ENST00000411806 470 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 CYCSP33-201ENST00000414485 327 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC13P31276 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC13P31276 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC13P31276 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC13P31276 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC13P31276 RNU6-120P-201ENST00000516077 103 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 RNU6-699P-201ENST00000517081 110 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AL137161.1-201ENST00000532231 390 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC113195.1-201ENST00000579952 141 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 MIR5007-201ENST00000583098 95 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC023043.2-201ENST00000589678 1026 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 RPL30P11-203ENST00000598995 310 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 AC104695.3-201ENST00000604052 296 ntBASIC2.44□□□□□ -2.02
HOXC13P31276 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC13P31276 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC13P31276 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 SNORD114-1-201ENST00000362705 72 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 SNORD56.1-201ENST00000362913 68 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.80-201ENST00000362996 102 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU6-450P-201ENST00000364654 107 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.324-201ENST00000365165 102 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.389-201ENST00000383924 113 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.404-201ENST00000383978 102 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU6-434P-201ENST00000384376 107 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.485-201ENST00000384395 102 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.496-201ENST00000384444 101 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 Y_RNA.645-201ENST00000391229 102 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 EIF4E2P1-201ENST00000393781 255 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 MIR450B-201ENST00000401182 78 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AL356320.1-201ENST00000429616 163 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AL591043.1-201ENST00000432461 424 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AP001025.1-201ENST00000486139 332 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AC079140.5-201ENST00000507882 310 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU6-1143P-201ENST00000516125 104 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 RNU2-53P-201ENST00000516257 147 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 MIR4287-201ENST00000579398 78 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 PRR13P7-201ENST00000605538 430 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AC009229.3-201ENST00000608056 282 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AC062037.2-201ENST00000610137 73 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 PISRT1.1-201ENST00000616930 107 ntBASIC2.43□□□□□ -2.02
HOXC13P31276 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC13P31276 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC13P31276 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC13P31276 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC13P31276 RNU1-72P-201ENST00000362976 153 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 RNU6-529P-201ENST00000363383 104 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 RNU6-527P-201ENST00000363425 104 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 Y_RNA.252-201ENST00000364556 101 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 RNU6-209P-201ENST00000384118 107 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 SNORA64-201ENST00000384674 134 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 MIR186-201ENST00000384988 86 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 RNA5SP219-201ENST00000390940 113 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 SNORD70.1-201ENST00000391007 85 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 RNU6-1140P-201ENST00000410517 106 ntBASIC2.42□□□□□ -2.02
HOXC13P31276 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms