Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HMGN2P9-201ENST00000476875 229 ntBASIC4.26□□□□□ -1.73
VARSP26640 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.26□□□□□ -1.73
VARSP26640 SNORD19.2-201ENST00000516978 73 ntBASIC4.26□□□□□ -1.73
VARSP26640 HIGD1AP1-201ENST00000550979 275 ntBASIC4.26□□□□□ -1.73
VARSP26640 AC093732.2-201ENST00000607950 274 ntBASIC4.26□□□□□ -1.73
VARSP26640 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.26□□□□□ -1.73
VARSP26640 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VARSP26640 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
VARSP26640 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VARSP26640 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VARSP26640 Y_RNA.328-201ENST00000365208 113 ntBASIC4.25□□□□□ -1.73
VARSP26640 SNORA51.5-201ENST00000384126 131 ntBASIC4.25□□□□□ -1.73
VARSP26640 AL353705.1-201ENST00000433468 480 ntBASIC4.25□□□□□ -1.73
VARSP26640 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
VARSP26640 AL021397.1-201ENST00000451806 248 ntBASIC4.25□□□□□ -1.73
VARSP26640 AC080013.2-201ENST00000460866 323 ntBASIC4.25□□□□□ -1.73
VARSP26640 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.25□□□□□ -1.73
VARSP26640 AC083906.5-201ENST00000503722 328 ntBASIC4.25□□□□□ -1.73
VARSP26640 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.25□□□□□ -1.73
VARSP26640 IGLVIV-65-201ENST00000517313 360 ntBASIC4.25□□□□□ -1.73
VARSP26640 AC007012.1-201ENST00000567192 175 ntBASIC4.25□□□□□ -1.73
VARSP26640 AC012493.2-201ENST00000595083 291 ntBASIC4.25□□□□□ -1.73
VARSP26640 uc_338.4-201ENST00000616635 176 ntBASIC4.25□□□□□ -1.73
VARSP26640 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.25□□□□□ -1.73
VARSP26640 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
VARSP26640 AC026241.1-201ENST00000517873 2142 ntBASIC4.25□□□□□ -1.73
VARSP26640 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VARSP26640 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.24□□□□□ -1.73
VARSP26640 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARSP26640 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARSP26640 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VARSP26640 Y_RNA.85-201ENST00000363014 111 ntBASIC4.24□□□□□ -1.73
VARSP26640 SNORD14D-201ENST00000384390 87 ntBASIC4.24□□□□□ -1.73
VARSP26640 Y_RNA.528-201ENST00000384575 108 ntBASIC4.24□□□□□ -1.73
VARSP26640 MIR23B-201ENST00000384832 97 ntBASIC4.24□□□□□ -1.73
VARSP26640 SNORD12C-201ENST00000386307 89 ntBASIC4.24□□□□□ -1.73
VARSP26640 MIR147B-201ENST00000390185 80 ntBASIC4.24□□□□□ -1.73
VARSP26640 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VARSP26640 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.24□□□□□ -1.73
VARSP26640 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.24□□□□□ -1.73
VARSP26640 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.24□□□□□ -1.73
VARSP26640 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
VARSP26640 AL162151.2-201ENST00000448875 158 ntBASIC4.24□□□□□ -1.73
VARSP26640 SNORD65B-201ENST00000459126 73 ntBASIC4.24□□□□□ -1.73
VARSP26640 snoU13.28-201ENST00000459235 104 ntBASIC4.24□□□□□ -1.73
VARSP26640 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.24□□□□□ -1.73
VARSP26640 CYP4A43P-201ENST00000568156 121 ntBASIC4.24□□□□□ -1.73
VARSP26640 AC105245.1-201ENST00000581934 244 ntBASIC4.24□□□□□ -1.73
VARSP26640 AC097639.2-201ENST00000603159 172 ntBASIC4.24□□□□□ -1.73
VARSP26640 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.24□□□□□ -1.73
VARSP26640 AC009831.4-201ENST00000620744 325 ntBASIC4.24□□□□□ -1.73
VARSP26640 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.24□□□□□ -1.73
VARSP26640 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VARSP26640 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARSP26640 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARSP26640 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VARSP26640 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARSP26640 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VARSP26640 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARSP26640 AC010733.2-201ENST00000589496 5702 ntBASIC4.23□□□□□ -1.73
VARSP26640 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VARSP26640 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.23□□□□□ -1.73
VARSP26640 AL136360.1-201ENST00000503377 1900 ntBASIC4.23□□□□□ -1.73
VARSP26640 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
VARSP26640 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARSP26640 Y_RNA.163-201ENST00000363702 113 ntBASIC4.23□□□□□ -1.73
VARSP26640 RNU4-13P-201ENST00000364019 141 ntBASIC4.23□□□□□ -1.73
VARSP26640 SNORA51.10-201ENST00000384418 136 ntBASIC4.23□□□□□ -1.73
VARSP26640 MIR181A2-201ENST00000384863 110 ntBASIC4.23□□□□□ -1.73
VARSP26640 MIR1302-5-201ENST00000408164 150 ntBASIC4.23□□□□□ -1.73
VARSP26640 RPS29P17-201ENST00000430795 166 ntBASIC4.23□□□□□ -1.73
VARSP26640 MTATP6P21-201ENST00000440681 189 ntBASIC4.23□□□□□ -1.73
VARSP26640 AC023449.1-201ENST00000454464 154 ntBASIC4.23□□□□□ -1.73
VARSP26640 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.23□□□□□ -1.73
VARSP26640 RNU7-57P-201ENST00000459540 60 ntBASIC4.23□□□□□ -1.73
VARSP26640 AC010598.1-201ENST00000510378 103 ntBASIC4.23□□□□□ -1.73
VARSP26640 RNA5SP20-201ENST00000515976 84 ntBASIC4.23□□□□□ -1.73
VARSP26640 SNORD77.4-201ENST00000516158 81 ntBASIC4.23□□□□□ -1.73
VARSP26640 RNU1-104P-201ENST00000517280 175 ntBASIC4.23□□□□□ -1.73
VARSP26640 AP003327.1-201ENST00000529684 127 ntBASIC4.23□□□□□ -1.73
VARSP26640 AL929325.1-201ENST00000603096 117 ntBASIC4.23□□□□□ -1.73
VARSP26640 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VARSP26640 ZYXP1-201ENST00000617638 118 ntBASIC4.23□□□□□ -1.73
VARSP26640 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VARSP26640 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VARSP26640 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VARSP26640 MAPK10-372ENST00000641954 3413 ntBASIC4.23□□□□□ -1.73
VARSP26640 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARSP26640 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
VARSP26640 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.22□□□□□ -1.73
VARSP26640 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.22□□□□□ -1.73
VARSP26640 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VARSP26640 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VARSP26640 MIR891A-201ENST00000401237 79 ntBASIC4.22□□□□□ -1.73
VARSP26640 Z98941.1-201ENST00000407764 100 ntBASIC4.22□□□□□ -1.73
VARSP26640 RNA5SP511-201ENST00000410487 115 ntBASIC4.22□□□□□ -1.73
VARSP26640 RNU2-49P-201ENST00000410666 184 ntBASIC4.22□□□□□ -1.73
VARSP26640 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
VARSP26640 RNA5SP127-201ENST00000411051 133 ntBASIC4.22□□□□□ -1.73
VARSP26640 YME1L1P1-201ENST00000429435 297 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms