Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CYCSP35-201ENST00000451978 304 ntBASIC3.91□□□□□ -1.78
LIG1P18858 SNORD105B-201ENST00000458770 79 ntBASIC3.91□□□□□ -1.78
LIG1P18858 AC091179.3-201ENST00000474761 144 ntBASIC3.91□□□□□ -1.78
LIG1P18858 AC090525.1-201ENST00000479116 478 ntBASIC3.91□□□□□ -1.78
LIG1P18858 RNA5SP380-201ENST00000517190 98 ntBASIC3.91□□□□□ -1.78
LIG1P18858 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.91□□□□□ -1.78
LIG1P18858 AC006199.1-201ENST00000548728 219 ntBASIC3.91□□□□□ -1.78
LIG1P18858 HIGD1AP1-201ENST00000550979 275 ntBASIC3.91□□□□□ -1.78
LIG1P18858 CYP4A27P-201ENST00000567218 190 ntBASIC3.91□□□□□ -1.78
LIG1P18858 AC107294.3-201ENST00000609211 526 ntBASIC3.91□□□□□ -1.78
LIG1P18858 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.91□□□□□ -1.78
LIG1P18858 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.91□□□□□ -1.78
LIG1P18858 AC091932.3-201ENST00000624223 323 ntBASIC3.91□□□□□ -1.78
LIG1P18858 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIG1P18858 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LIG1P18858 AC002543.1-201ENST00000299783 1954 ntBASIC3.91□□□□□ -1.78
LIG1P18858 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIG1P18858 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIG1P18858 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.9□□□□□ -1.78
LIG1P18858 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIG1P18858 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIG1P18858 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIG1P18858 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.9□□□□□ -1.79
LIG1P18858 RNU1-62P-201ENST00000362599 164 ntBASIC3.9□□□□□ -1.79
LIG1P18858 RNU6-1117P-201ENST00000384525 104 ntBASIC3.9□□□□□ -1.79
LIG1P18858 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIG1P18858 CYCSP48-201ENST00000417124 323 ntBASIC3.9□□□□□ -1.79
LIG1P18858 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.9□□□□□ -1.79
LIG1P18858 AL353705.1-201ENST00000433468 480 ntBASIC3.9□□□□□ -1.79
LIG1P18858 HMGN1P18-201ENST00000457642 277 ntBASIC3.9□□□□□ -1.79
LIG1P18858 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.9□□□□□ -1.79
LIG1P18858 MIR3145-201ENST00000580727 82 ntBASIC3.9□□□□□ -1.79
LIG1P18858 MIR3609-201ENST00000582661 80 ntBASIC3.9□□□□□ -1.79
LIG1P18858 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.9□□□□□ -1.79
LIG1P18858 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.9□□□□□ -1.79
LIG1P18858 AC091564.4-201ENST00000533934 2194 ntBASIC3.89□□□□□ -1.79
LIG1P18858 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIG1P18858 RNU6-1272P-201ENST00000362776 107 ntBASIC3.89□□□□□ -1.79
LIG1P18858 RNU6-312P-201ENST00000364629 107 ntBASIC3.89□□□□□ -1.79
LIG1P18858 MIR490-201ENST00000384865 128 ntBASIC3.89□□□□□ -1.79
LIG1P18858 MIR7-3-201ENST00000384898 110 ntBASIC3.89□□□□□ -1.79
LIG1P18858 AC009963.1-201ENST00000417265 157 ntBASIC3.89□□□□□ -1.79
LIG1P18858 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.89□□□□□ -1.79
LIG1P18858 HMGB3P3-201ENST00000510526 400 ntBASIC3.89□□□□□ -1.79
LIG1P18858 RNU6-155P-201ENST00000516347 100 ntBASIC3.89□□□□□ -1.79
LIG1P18858 SCARNA20.6-201ENST00000517251 106 ntBASIC3.89□□□□□ -1.79
LIG1P18858 AC107934.2-201ENST00000518653 310 ntBASIC3.89□□□□□ -1.79
LIG1P18858 SUMO2P18-201ENST00000518873 252 ntBASIC3.89□□□□□ -1.79
LIG1P18858 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.89□□□□□ -1.79
LIG1P18858 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.89□□□□□ -1.79
LIG1P18858 AC069200.1-201ENST00000609511 323 ntBASIC3.89□□□□□ -1.79
LIG1P18858 AL008718.3-201ENST00000610217 321 ntBASIC3.89□□□□□ -1.79
LIG1P18858 AC019176.2-201ENST00000611579 315 ntBASIC3.89□□□□□ -1.79
LIG1P18858 MFSD8-233ENST00000641482 4860 ntBASIC3.89□□□□□ -1.79
LIG1P18858 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIG1P18858 AC092435.3-201ENST00000565538 3654 ntBASIC3.88□□□□□ -1.79
LIG1P18858 AP003122.5-201ENST00000527668 3766 ntBASIC3.88□□□□□ -1.79
LIG1P18858 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.88□□□□□ -1.79
LIG1P18858 RNU4-35P-201ENST00000362588 141 ntBASIC3.88□□□□□ -1.79
LIG1P18858 RNA5SP50-201ENST00000363731 107 ntBASIC3.88□□□□□ -1.79
LIG1P18858 SNORD50B-201ENST00000364995 70 ntBASIC3.88□□□□□ -1.79
LIG1P18858 DYNLT3P1-201ENST00000378574 347 ntBASIC3.88□□□□□ -1.79
LIG1P18858 U3.26-201ENST00000391236 204 ntBASIC3.88□□□□□ -1.79
LIG1P18858 MIR320B2-201ENST00000408479 138 ntBASIC3.88□□□□□ -1.79
LIG1P18858 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.88□□□□□ -1.79
LIG1P18858 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
LIG1P18858 IFNA11P-201ENST00000446352 526 ntBASIC3.88□□□□□ -1.79
LIG1P18858 RN7SL293P-201ENST00000481765 281 ntBASIC3.88□□□□□ -1.79
LIG1P18858 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.88□□□□□ -1.79
LIG1P18858 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.88□□□□□ -1.79
LIG1P18858 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.88□□□□□ -1.79
LIG1P18858 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.88□□□□□ -1.79
LIG1P18858 SNRPGP20-201ENST00000604477 205 ntBASIC3.88□□□□□ -1.79
LIG1P18858 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.88□□□□□ -1.79
LIG1P18858 MIR3199-2-201ENST00000636243 86 ntBASIC3.88□□□□□ -1.79
LIG1P18858 SNORD98-201ENST00000636377 67 ntBASIC3.88□□□□□ -1.79
LIG1P18858 MIR3674-201ENST00000636576 68 ntBASIC3.88□□□□□ -1.79
LIG1P18858 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIG1P18858 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.88□□□□□ -1.79
LIG1P18858 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.87□□□□□ -1.79
LIG1P18858 Y_RNA.7-201ENST00000362352 102 ntBASIC3.87□□□□□ -1.79
LIG1P18858 RNA5SP119-201ENST00000362715 117 ntBASIC3.87□□□□□ -1.79
LIG1P18858 RNA5SP475-201ENST00000410568 110 ntBASIC3.87□□□□□ -1.79
LIG1P18858 AC126124.2-201ENST00000413542 321 ntBASIC3.87□□□□□ -1.79
LIG1P18858 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.87□□□□□ -1.79
LIG1P18858 AC005300.1-201ENST00000428401 373 ntBASIC3.87□□□□□ -1.79
LIG1P18858 RPL23AP58-201ENST00000440453 469 ntBASIC3.87□□□□□ -1.79
LIG1P18858 RPL21P10-201ENST00000463521 490 ntBASIC3.87□□□□□ -1.79
LIG1P18858 AC140059.1-201ENST00000489238 361 ntBASIC3.87□□□□□ -1.79
LIG1P18858 AIG1P1-201ENST00000503376 148 ntBASIC3.87□□□□□ -1.79
LIG1P18858 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.87□□□□□ -1.79
LIG1P18858 AP002001.1-203ENST00000534002 267 ntBASIC3.87□□□□□ -1.79
LIG1P18858 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.87□□□□□ -1.79
LIG1P18858 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.87□□□□□ -1.79
LIG1P18858 DEFB117-201ENST00000602356 141 ntBASIC3.87□□□□□ -1.79
LIG1P18858 AC084757.4-201ENST00000616350 526 ntBASIC3.87□□□□□ -1.79
LIG1P18858 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIG1P18858 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIG1P18858 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.86□□□□□ -1.79
LIG1P18858 Y_RNA.23-201ENST00000362496 106 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms